Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
RNF213Q63HN8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
RNF213Q63HN8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
RNF213Q63HN8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
RNF213Q63HN8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC10.27□□□□□ -0.77
RNF213Q63HN8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
RNF213Q63HN8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
RNF213Q63HN8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC10.27□□□□□ -0.77
RNF213Q63HN8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC10.27□□□□□ -0.77
RNF213Q63HN8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC10.27□□□□□ -0.77
RNF213Q63HN8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC10.27□□□□□ -0.77
RNF213Q63HN8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC10.27□□□□□ -0.77
RNF213Q63HN8 Z83851.2-201ENST00000609564 659 ntBASIC10.27□□□□□ -0.77
RNF213Q63HN8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
RNF213Q63HN8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
RNF213Q63HN8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 AC091607.1-201ENST00000490318 1060 ntBASIC10.26□□□□□ -0.77
RNF213Q63HN8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 RNF126P1-202ENST00000569893 925 ntBASIC10.26□□□□□ -0.77
RNF213Q63HN8 MIR5100-201ENST00000579544 119 ntBASIC10.26□□□□□ -0.77
RNF213Q63HN8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 AC011484.1-201ENST00000377652 1995 ntBASIC10.26□□□□□ -0.77
RNF213Q63HN8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC10.26□□□□□ -0.77
RNF213Q63HN8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RNF213Q63HN8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 AC020928.2-201ENST00000588717 2197 ntBASIC10.25□□□□□ -0.77
RNF213Q63HN8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 CD99-202ENST00000381180 530 ntTSL 2 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
RNF213Q63HN8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RNF213Q63HN8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms