Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 AC117947.1-201ENST00000427448 529 ntBASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 CCR12P-201ENST00000446203 998 ntBASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 AC104076.2-201ENST00000448912 469 ntBASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 FAM87A-204ENST00000613235 858 ntBASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.3■□□□□ 0.2
ARFGEF3Q5TH69 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 AL137013.1-201ENST00000432946 1228 ntBASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 AC006011.2-201ENST00000621313 1158 ntBASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.29■□□□□ 0.2
ARFGEF3Q5TH69 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 AL138966.2-201ENST00000621997 464 ntBASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 AC063952.2-201ENST00000498792 1227 ntBASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 AC116562.4-202ENST00000641738 218 ntBASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARFGEF3Q5TH69 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms