Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SNAPC4Q5SXM2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC31.41■■■□□ 2.62
SNAPC4Q5SXM2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SNAPC4Q5SXM2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
SNAPC4Q5SXM2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SNAPC4Q5SXM2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
SNAPC4Q5SXM2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SNAPC4Q5SXM2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SNAPC4Q5SXM2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SNAPC4Q5SXM2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
SNAPC4Q5SXM2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 LINC01711-201ENST00000598340 967 ntBASIC31.4■■■□□ 2.62
SNAPC4Q5SXM2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 SAPCD2P3-201ENST00000455031 850 ntBASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
SNAPC4Q5SXM2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
SNAPC4Q5SXM2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SNAPC4Q5SXM2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SNAPC4Q5SXM2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
SNAPC4Q5SXM2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
SNAPC4Q5SXM2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC31.38■■■□□ 2.61
SNAPC4Q5SXM2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SNAPC4Q5SXM2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 REXO1L6P-202ENST00000619970 1078 ntBASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SNAPC4Q5SXM2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 MIR1233-2-201ENST00000408138 82 ntBASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 MIR1233-1-201ENST00000408722 82 ntBASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 MIR3917-201ENST00000580971 93 ntBASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 TK1-205ENST00000590862 642 ntTSL 3 BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
SNAPC4Q5SXM2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms