Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
GABREP78334 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.25■□□□□ 0.51
GABREP78334 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.25■□□□□ 0.51
GABREP78334 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.25■□□□□ 0.51
GABREP78334 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GABREP78334 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.25■□□□□ 0.51
GABREP78334 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GABREP78334 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GABREP78334 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.25■□□□□ 0.51
GABREP78334 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GABREP78334 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.24■□□□□ 0.51
GABREP78334 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.24■□□□□ 0.51
GABREP78334 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.24■□□□□ 0.51
GABREP78334 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.24■□□□□ 0.51
GABREP78334 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
GABREP78334 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.24■□□□□ 0.51
GABREP78334 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.24■□□□□ 0.51
GABREP78334 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.24■□□□□ 0.51
GABREP78334 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GABREP78334 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
GABREP78334 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GABREP78334 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.23■□□□□ 0.51
GABREP78334 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GABREP78334 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.23■□□□□ 0.51
GABREP78334 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
GABREP78334 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.23■□□□□ 0.51
GABREP78334 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 SPDYE15P-201ENST00000424157 909 ntBASIC18.23■□□□□ 0.51
GABREP78334 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.23■□□□□ 0.51
GABREP78334 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
GABREP78334 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.23■□□□□ 0.51
GABREP78334 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.23■□□□□ 0.51
GABREP78334 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.23■□□□□ 0.51
GABREP78334 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GABREP78334 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GABREP78334 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.23■□□□□ 0.51
GABREP78334 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GABREP78334 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GABREP78334 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.22■□□□□ 0.51
GABREP78334 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
GABREP78334 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GABREP78334 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GABREP78334 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.22■□□□□ 0.51
GABREP78334 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GABREP78334 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.22■□□□□ 0.51
GABREP78334 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.22■□□□□ 0.51
GABREP78334 AC092119.3-201ENST00000612618 583 ntBASIC18.22■□□□□ 0.51
GABREP78334 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GABREP78334 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
GABREP78334 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.22■□□□□ 0.51
GABREP78334 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.22■□□□□ 0.51
GABREP78334 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.22■□□□□ 0.51
GABREP78334 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GABREP78334 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GABREP78334 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GABREP78334 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GABREP78334 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GABREP78334 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
GABREP78334 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GABREP78334 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.21■□□□□ 0.51
GABREP78334 AL157384.1-201ENST00000445995 2473 ntBASIC18.21■□□□□ 0.51
GABREP78334 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.21■□□□□ 0.51
GABREP78334 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GABREP78334 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.21■□□□□ 0.51
GABREP78334 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GABREP78334 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GABREP78334 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.21■□□□□ 0.51
GABREP78334 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GABREP78334 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.21■□□□□ 0.51
GABREP78334 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GABREP78334 PRELID1P1-202ENST00000567272 903 ntBASIC18.21■□□□□ 0.51
GABREP78334 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms