Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPS4XP62701 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RPS4XP62701 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RPS4XP62701 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPS4XP62701 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPS4XP62701 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RPS4XP62701 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
RPS4XP62701 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
RPS4XP62701 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.33■□□□□ 0.37
RPS4XP62701 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPS4XP62701 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RPS4XP62701 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RPS4XP62701 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RPS4XP62701 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPS4XP62701 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPS4XP62701 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPS4XP62701 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPS4XP62701 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPS4XP62701 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.33■□□□□ 0.36
RPS4XP62701 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.33■□□□□ 0.36
RPS4XP62701 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RPS4XP62701 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.33■□□□□ 0.36
RPS4XP62701 AC073912.3-201ENST00000624414 853 ntBASIC17.33■□□□□ 0.36
RPS4XP62701 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPS4XP62701 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPS4XP62701 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.33■□□□□ 0.36
RPS4XP62701 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
RPS4XP62701 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPS4XP62701 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
RPS4XP62701 AL138781.2-201ENST00000617896 1843 ntBASIC17.33■□□□□ 0.36
RPS4XP62701 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RPS4XP62701 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.32■□□□□ 0.36
RPS4XP62701 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.32■□□□□ 0.36
RPS4XP62701 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.32■□□□□ 0.36
RPS4XP62701 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 FP475955.4-201ENST00000623131 1990 ntBASIC17.32■□□□□ 0.36
RPS4XP62701 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.32■□□□□ 0.36
RPS4XP62701 AC012618.2-201ENST00000428058 849 ntBASIC17.32■□□□□ 0.36
RPS4XP62701 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.32■□□□□ 0.36
RPS4XP62701 MTDHP1-201ENST00000605323 784 ntBASIC17.32■□□□□ 0.36
RPS4XP62701 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 IRX1P1-201ENST00000438849 1838 ntBASIC17.32■□□□□ 0.36
RPS4XP62701 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
RPS4XP62701 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPS4XP62701 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RPS4XP62701 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPS4XP62701 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RPS4XP62701 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.31■□□□□ 0.36
RPS4XP62701 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RPS4XP62701 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPS4XP62701 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RPS4XP62701 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.31■□□□□ 0.36
RPS4XP62701 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPS4XP62701 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.31■□□□□ 0.36
RPS4XP62701 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPS4XP62701 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPS4XP62701 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RPS4XP62701 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.31■□□□□ 0.36
RPS4XP62701 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.31■□□□□ 0.36
RPS4XP62701 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RPS4XP62701 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.31■□□□□ 0.36
RPS4XP62701 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RPS4XP62701 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.31■□□□□ 0.36
RPS4XP62701 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
RPS4XP62701 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.31■□□□□ 0.36
RPS4XP62701 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.31■□□□□ 0.36
RPS4XP62701 AL023875.1-201ENST00000640777 796 ntBASIC17.31■□□□□ 0.36
RPS4XP62701 RNF165-205ENST00000588679 2904 ntBASIC17.31■□□□□ 0.36
RPS4XP62701 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
RPS4XP62701 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.31■□□□□ 0.36
RPS4XP62701 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPS4XP62701 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPS4XP62701 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RPS4XP62701 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPS4XP62701 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RPS4XP62701 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPS4XP62701 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.31■□□□□ 0.36
RPS4XP62701 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.3■□□□□ 0.36
RPS4XP62701 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RPS4XP62701 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS4XP62701 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms