Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 FAM21FP-204ENST00000608637 956 ntBASIC14.88□□□□□ -0.03
ERVFC1-1P60608 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 AL391005.1-201ENST00000623953 2435 ntBASIC14.88□□□□□ -0.03
ERVFC1-1P60608 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1-1P60608 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 AL354751.1-201ENST00000412768 1863 ntBASIC14.87□□□□□ -0.03
ERVFC1-1P60608 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.87□□□□□ -0.03
ERVFC1-1P60608 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 AC233992.3-201ENST00000607491 485 ntBASIC14.87□□□□□ -0.03
ERVFC1-1P60608 AC105233.4-201ENST00000642045 216 ntBASIC14.87□□□□□ -0.03
ERVFC1-1P60608 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ERVFC1-1P60608 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 IRS3P-201ENST00000223076 1006 ntBASIC14.86□□□□□ -0.03
ERVFC1-1P60608 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ERVFC1-1P60608 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 AP001271.2-201ENST00000624018 1556 ntBASIC14.85□□□□□ -0.03
ERVFC1-1P60608 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 AC046158.3-201ENST00000624947 2558 ntBASIC14.85□□□□□ -0.03
ERVFC1-1P60608 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 OR6D1P-203ENST00000641209 4860 ntBASIC14.85□□□□□ -0.03
ERVFC1-1P60608 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
ERVFC1-1P60608 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms