Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB38P57729 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB38P57729 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB38P57729 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RAB38P57729 UNC93B2-201ENST00000285383 730 ntBASIC18.06■□□□□ 0.48
RAB38P57729 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RAB38P57729 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.06■□□□□ 0.48
RAB38P57729 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.06■□□□□ 0.48
RAB38P57729 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RAB38P57729 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB38P57729 AL355075.4-201ENST00000554988 638 ntBASIC18.06■□□□□ 0.48
RAB38P57729 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB38P57729 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB38P57729 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB38P57729 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB38P57729 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB38P57729 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB38P57729 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB38P57729 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB38P57729 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RAB38P57729 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB38P57729 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RAB38P57729 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RAB38P57729 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB38P57729 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB38P57729 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RAB38P57729 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB38P57729 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RAB38P57729 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB38P57729 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RAB38P57729 RBM17P1-201ENST00000453646 1190 ntBASIC18.05■□□□□ 0.48
RAB38P57729 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RAB38P57729 PRSS44-201ENST00000515154 1146 ntBASIC18.05■□□□□ 0.48
RAB38P57729 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.05■□□□□ 0.48
RAB38P57729 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB38P57729 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.05■□□□□ 0.48
RAB38P57729 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB38P57729 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.05■□□□□ 0.48
RAB38P57729 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RAB38P57729 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB38P57729 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 KRT8P11-201ENST00000409686 1436 ntBASIC18.05■□□□□ 0.48
RAB38P57729 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB38P57729 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB38P57729 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RAB38P57729 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB38P57729 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB38P57729 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB38P57729 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB38P57729 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RAB38P57729 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB38P57729 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB38P57729 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.04■□□□□ 0.48
RAB38P57729 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB38P57729 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB38P57729 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB38P57729 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB38P57729 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RAB38P57729 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB38P57729 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB38P57729 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB38P57729 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB38P57729 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB38P57729 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB38P57729 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RAB38P57729 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB38P57729 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB38P57729 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB38P57729 AC097488.1-201ENST00000507834 756 ntBASIC18.03■□□□□ 0.48
RAB38P57729 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB38P57729 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAB38P57729 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB38P57729 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.03■□□□□ 0.48
RAB38P57729 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.03■□□□□ 0.48
RAB38P57729 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.03■□□□□ 0.48
RAB38P57729 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RAB38P57729 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms