Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.5■□□□□ 0.87
CDH8P55286 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDH8P55286 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH8P55286 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH8P55286 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH8P55286 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH8P55286 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH8P55286 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.49■□□□□ 0.87
CDH8P55286 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.49■□□□□ 0.87
CDH8P55286 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CDH8P55286 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH8P55286 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH8P55286 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 AC097488.1-201ENST00000507834 756 ntBASIC20.49■□□□□ 0.87
CDH8P55286 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH8P55286 SLC25A1P4-201ENST00000567977 778 ntBASIC20.49■□□□□ 0.87
CDH8P55286 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH8P55286 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.49■□□□□ 0.87
CDH8P55286 KRT8P11-201ENST00000409686 1436 ntBASIC20.49■□□□□ 0.87
CDH8P55286 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH8P55286 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CDH8P55286 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH8P55286 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH8P55286 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH8P55286 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH8P55286 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CDH8P55286 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 MIR1238-201ENST00000408483 83 ntBASIC20.48■□□□□ 0.87
CDH8P55286 TSPY23P-201ENST00000440136 739 ntBASIC20.48■□□□□ 0.87
CDH8P55286 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.48■□□□□ 0.87
CDH8P55286 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 BX088651.1-201ENST00000540551 451 ntBASIC20.48■□□□□ 0.87
CDH8P55286 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.48■□□□□ 0.87
CDH8P55286 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.48■□□□□ 0.87
CDH8P55286 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.48■□□□□ 0.87
CDH8P55286 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH8P55286 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH8P55286 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH8P55286 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CDH8P55286 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH8P55286 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH8P55286 KRT8P9-201ENST00000558927 1449 ntBASIC20.47■□□□□ 0.87
CDH8P55286 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH8P55286 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDH8P55286 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH8P55286 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH8P55286 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH8P55286 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDH8P55286 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.47■□□□□ 0.87
CDH8P55286 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH8P55286 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH8P55286 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.47■□□□□ 0.87
CDH8P55286 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH8P55286 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
CDH8P55286 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH8P55286 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH8P55286 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH8P55286 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH8P55286 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH8P55286 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CDH8P55286 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CDH8P55286 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CDH8P55286 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH8P55286 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH8P55286 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH8P55286 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH8P55286 CRYGFP-201ENST00000418459 633 ntBASIC20.46■□□□□ 0.87
CDH8P55286 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.46■□□□□ 0.87
CDH8P55286 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH8P55286 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH8P55286 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH8P55286 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH8P55286 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH8P55286 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms