Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.8■□□□□ 0.76
PMS2P54278 AC098934.4-201ENST00000564127 592 ntBASIC19.8■□□□□ 0.76
PMS2P54278 MIR4758-201ENST00000577688 71 ntBASIC19.8■□□□□ 0.76
PMS2P54278 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.8■□□□□ 0.76
PMS2P54278 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PMS2P54278 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.8■□□□□ 0.76
PMS2P54278 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.8■□□□□ 0.76
PMS2P54278 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PMS2P54278 AL133373.2-201ENST00000623187 2828 ntBASIC19.8■□□□□ 0.76
PMS2P54278 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PMS2P54278 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.79■□□□□ 0.76
PMS2P54278 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS2P54278 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.79■□□□□ 0.76
PMS2P54278 AC116351.2-201ENST00000606540 1585 ntBASIC19.79■□□□□ 0.76
PMS2P54278 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS2P54278 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS2P54278 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PMS2P54278 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS2P54278 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS2P54278 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.79■□□□□ 0.76
PMS2P54278 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PMS2P54278 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.79■□□□□ 0.76
PMS2P54278 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.79■□□□□ 0.76
PMS2P54278 CYP2T3P-201ENST00000601990 817 ntBASIC19.79■□□□□ 0.76
PMS2P54278 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS2P54278 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PMS2P54278 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PMS2P54278 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PMS2P54278 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.79■□□□□ 0.76
PMS2P54278 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.79■□□□□ 0.76
PMS2P54278 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PMS2P54278 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS2P54278 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS2P54278 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.78■□□□□ 0.76
PMS2P54278 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.78■□□□□ 0.76
PMS2P54278 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.78■□□□□ 0.76
PMS2P54278 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.78■□□□□ 0.76
PMS2P54278 CYP2T1P-201ENST00000432607 1285 ntBASIC19.78■□□□□ 0.76
PMS2P54278 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.78■□□□□ 0.76
PMS2P54278 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.78■□□□□ 0.76
PMS2P54278 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.78■□□□□ 0.76
PMS2P54278 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PMS2P54278 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS2P54278 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PMS2P54278 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PMS2P54278 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PMS2P54278 AL354751.1-201ENST00000412768 1863 ntBASIC19.77■□□□□ 0.76
PMS2P54278 AL512353.2-201ENST00000448759 1962 ntBASIC19.77■□□□□ 0.76
PMS2P54278 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PMS2P54278 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PMS2P54278 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PMS2P54278 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.77■□□□□ 0.76
PMS2P54278 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.77■□□□□ 0.76
PMS2P54278 C2orf69P4-201ENST00000565394 541 ntBASIC19.77■□□□□ 0.76
PMS2P54278 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.77■□□□□ 0.76
PMS2P54278 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.77■□□□□ 0.76
PMS2P54278 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.77■□□□□ 0.76
PMS2P54278 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.77■□□□□ 0.76
PMS2P54278 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PMS2P54278 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.77■□□□□ 0.76
PMS2P54278 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.77■□□□□ 0.76
PMS2P54278 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.77■□□□□ 0.75
PMS2P54278 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
PMS2P54278 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
PMS2P54278 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
PMS2P54278 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PMS2P54278 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PMS2P54278 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.76■□□□□ 0.75
PMS2P54278 AC138932.1-201ENST00000534164 6830 ntBASIC19.76■□□□□ 0.75
PMS2P54278 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
PMS2P54278 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.76■□□□□ 0.75
PMS2P54278 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.76■□□□□ 0.75
PMS2P54278 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.76■□□□□ 0.75
PMS2P54278 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS2P54278 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms