Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC27.53■■■□□ 2
CLTCL1P53675 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
CLTCL1P53675 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CLTCL1P53675 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC27.52■■■□□ 2
CLTCL1P53675 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC27.52■■■□□ 2
CLTCL1P53675 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC27.52■■■□□ 2
CLTCL1P53675 NPAP1P7-201ENST00000613027 823 ntBASIC27.52■■■□□ 2
CLTCL1P53675 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC27.52■■■□□ 2
CLTCL1P53675 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC27.52■■■□□ 2
CLTCL1P53675 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC27.52■■■□□ 2
CLTCL1P53675 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CLTCL1P53675 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC27.52■■■□□ 2
CLTCL1P53675 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC27.52■■■□□ 2
CLTCL1P53675 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC27.52■■■□□ 2
CLTCL1P53675 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC27.52■■■□□ 2
CLTCL1P53675 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
CLTCL1P53675 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CLTCL1P53675 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC27.51■■□□□ 1.99
CLTCL1P53675 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
CLTCL1P53675 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC27.51■■□□□ 1.99
CLTCL1P53675 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC27.51■■□□□ 1.99
CLTCL1P53675 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CLTCL1P53675 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CLTCL1P53675 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
CLTCL1P53675 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC27.51■■□□□ 1.99
CLTCL1P53675 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CLTCL1P53675 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC27.5■■□□□ 1.99
CLTCL1P53675 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CLTCL1P53675 AL645929.1-201ENST00000420084 975 ntBASIC27.5■■□□□ 1.99
CLTCL1P53675 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC27.5■■□□□ 1.99
CLTCL1P53675 AC012313.10-201ENST00000623509 926 ntBASIC27.5■■□□□ 1.99
CLTCL1P53675 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CLTCL1P53675 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CLTCL1P53675 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
CLTCL1P53675 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
CLTCL1P53675 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
CLTCL1P53675 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC27.5■■□□□ 1.99
CLTCL1P53675 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC27.49■■□□□ 1.99
CLTCL1P53675 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC27.49■■□□□ 1.99
CLTCL1P53675 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CLTCL1P53675 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
CLTCL1P53675 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC27.49■■□□□ 1.99
CLTCL1P53675 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CLTCL1P53675 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CLTCL1P53675 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC27.49■■□□□ 1.99
CLTCL1P53675 AC112907.3-201ENST00000577781 2400 ntBASIC27.49■■□□□ 1.99
CLTCL1P53675 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CLTCL1P53675 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC27.49■■□□□ 1.99
CLTCL1P53675 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC27.49■■□□□ 1.99
CLTCL1P53675 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CLTCL1P53675 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CLTCL1P53675 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CLTCL1P53675 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CLTCL1P53675 RASA4DP-201ENST00000460726 1199 ntBASIC27.49■■□□□ 1.99
CLTCL1P53675 SEC1P-202ENST00000473944 940 ntBASIC27.49■■□□□ 1.99
CLTCL1P53675 WDR88-203ENST00000592765 651 ntTSL 5 BASIC27.49■■□□□ 1.99
CLTCL1P53675 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
CLTCL1P53675 AC140113.3-201ENST00000605663 199 ntBASIC27.49■■□□□ 1.99
CLTCL1P53675 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CLTCL1P53675 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.48■■□□□ 1.99
CLTCL1P53675 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CLTCL1P53675 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CLTCL1P53675 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CLTCL1P53675 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CLTCL1P53675 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CLTCL1P53675 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CLTCL1P53675 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CLTCL1P53675 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
CLTCL1P53675 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC27.48■■□□□ 1.99
CLTCL1P53675 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC27.48■■□□□ 1.99
CLTCL1P53675 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC27.48■■□□□ 1.99
CLTCL1P53675 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CLTCL1P53675 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC27.48■■□□□ 1.99
CLTCL1P53675 CLEC4GP1-201ENST00000596555 870 ntBASIC27.48■■□□□ 1.99
CLTCL1P53675 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC27.48■■□□□ 1.99
CLTCL1P53675 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC27.48■■□□□ 1.99
CLTCL1P53675 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC27.47■■□□□ 1.99
CLTCL1P53675 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CLTCL1P53675 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC27.47■■□□□ 1.99
CLTCL1P53675 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
CLTCL1P53675 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC27.47■■□□□ 1.99
CLTCL1P53675 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CLTCL1P53675 TP73-202ENST00000354437 2140 ntTSL 5 BASIC27.47■■□□□ 1.99
CLTCL1P53675 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC27.47■■□□□ 1.99
CLTCL1P53675 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC27.47■■□□□ 1.99
CLTCL1P53675 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
CLTCL1P53675 AC092597.1-201ENST00000487352 616 ntBASIC27.47■■□□□ 1.99
CLTCL1P53675 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC27.47■■□□□ 1.99
CLTCL1P53675 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC27.47■■□□□ 1.99
CLTCL1P53675 FGF14-AS2-201ENST00000606448 1074 ntBASIC27.47■■□□□ 1.99
CLTCL1P53675 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CLTCL1P53675 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC27.47■■□□□ 1.99
CLTCL1P53675 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CLTCL1P53675 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC27.47■■□□□ 1.99
CLTCL1P53675 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CLTCL1P53675 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC27.46■■□□□ 1.99
CLTCL1P53675 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CLTCL1P53675 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CLTCL1P53675 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CLTCL1P53675 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC27.46■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms