Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.1■□□□□ 0.65
NUBP1P53384 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NUBP1P53384 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NUBP1P53384 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NUBP1P53384 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 AL031284.1-201ENST00000419297 478 ntBASIC19.1■□□□□ 0.65
NUBP1P53384 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
NUBP1P53384 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.1■□□□□ 0.65
NUBP1P53384 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 AC027281.2-201ENST00000623856 713 ntBASIC19.1■□□□□ 0.65
NUBP1P53384 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.1■□□□□ 0.65
NUBP1P53384 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.1■□□□□ 0.65
NUBP1P53384 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.1■□□□□ 0.65
NUBP1P53384 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUBP1P53384 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUBP1P53384 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUBP1P53384 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUBP1P53384 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.09■□□□□ 0.65
NUBP1P53384 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.09■□□□□ 0.65
NUBP1P53384 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NUBP1P53384 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
NUBP1P53384 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUBP1P53384 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.09■□□□□ 0.65
NUBP1P53384 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUBP1P53384 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.09■□□□□ 0.65
NUBP1P53384 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUBP1P53384 KRT18P67-201ENST00000432816 1264 ntBASIC19.09■□□□□ 0.65
NUBP1P53384 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.09■□□□□ 0.65
NUBP1P53384 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.09■□□□□ 0.65
NUBP1P53384 POLD2P1-201ENST00000511220 997 ntBASIC19.09■□□□□ 0.65
NUBP1P53384 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.09■□□□□ 0.65
NUBP1P53384 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NUBP1P53384 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.09■□□□□ 0.65
NUBP1P53384 AC099336.1-202ENST00000602961 463 ntBASIC19.09■□□□□ 0.65
NUBP1P53384 AL139424.1-201ENST00000607572 797 ntBASIC19.09■□□□□ 0.65
NUBP1P53384 AC108673.2-201ENST00000608909 565 ntBASIC19.09■□□□□ 0.65
NUBP1P53384 AL691403.2-201ENST00000618460 490 ntBASIC19.09■□□□□ 0.65
NUBP1P53384 AC079602.3-201ENST00000623931 403 ntBASIC19.09■□□□□ 0.65
NUBP1P53384 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUBP1P53384 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUBP1P53384 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUBP1P53384 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUBP1P53384 AL391807.1-203ENST00000604392 2365 ntBASIC19.08■□□□□ 0.65
NUBP1P53384 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.08■□□□□ 0.65
NUBP1P53384 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUBP1P53384 ZNF259P1-201ENST00000407656 1365 ntBASIC19.08■□□□□ 0.65
NUBP1P53384 AC233702.3-201ENST00000578656 1387 ntBASIC19.08■□□□□ 0.65
NUBP1P53384 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
NUBP1P53384 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.08■□□□□ 0.65
NUBP1P53384 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.08■□□□□ 0.65
NUBP1P53384 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC19.08■□□□□ 0.65
NUBP1P53384 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NUBP1P53384 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUBP1P53384 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUBP1P53384 ANKRD19P-201ENST00000338192 862 ntBASIC19.08■□□□□ 0.64
NUBP1P53384 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUBP1P53384 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.08■□□□□ 0.64
NUBP1P53384 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUBP1P53384 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUBP1P53384 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUBP1P53384 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.08■□□□□ 0.64
NUBP1P53384 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.08■□□□□ 0.64
NUBP1P53384 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
NUBP1P53384 AF186996.4-201ENST00000467186 377 ntBASIC19.08■□□□□ 0.64
NUBP1P53384 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC19.08■□□□□ 0.64
NUBP1P53384 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.08■□□□□ 0.64
NUBP1P53384 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.08■□□□□ 0.64
NUBP1P53384 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.08■□□□□ 0.64
NUBP1P53384 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.08■□□□□ 0.64
NUBP1P53384 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NUBP1P53384 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.08■□□□□ 0.64
NUBP1P53384 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUBP1P53384 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUBP1P53384 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUBP1P53384 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.07■□□□□ 0.64
NUBP1P53384 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.07■□□□□ 0.64
NUBP1P53384 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUBP1P53384 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.07■□□□□ 0.64
NUBP1P53384 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.07■□□□□ 0.64
NUBP1P53384 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUBP1P53384 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUBP1P53384 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUBP1P53384 FAM197Y8-203ENST00000450145 560 ntBASIC19.07■□□□□ 0.64
NUBP1P53384 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.07■□□□□ 0.64
NUBP1P53384 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.07■□□□□ 0.64
NUBP1P53384 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUBP1P53384 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUBP1P53384 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUBP1P53384 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms