Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.36■□□□□ 0.53
POLR2JP52435 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.36■□□□□ 0.53
POLR2JP52435 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR2JP52435 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
POLR2JP52435 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.36■□□□□ 0.53
POLR2JP52435 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
POLR2JP52435 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.36■□□□□ 0.53
POLR2JP52435 MIR5787-201ENST00000611784 55 ntBASIC18.36■□□□□ 0.53
POLR2JP52435 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR2JP52435 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.36■□□□□ 0.53
POLR2JP52435 AC073111.5-205ENST00000641717 521 ntBASIC18.36■□□□□ 0.53
POLR2JP52435 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
POLR2JP52435 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 AC135050.7-201ENST00000624508 2218 ntBASIC18.35■□□□□ 0.53
POLR2JP52435 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR2JP52435 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR2JP52435 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
POLR2JP52435 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
POLR2JP52435 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR2JP52435 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR2JP52435 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR2JP52435 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR2JP52435 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR2JP52435 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.35■□□□□ 0.53
POLR2JP52435 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
POLR2JP52435 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR2JP52435 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR2JP52435 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR2JP52435 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
POLR2JP52435 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR2JP52435 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2JP52435 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2JP52435 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR2JP52435 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2JP52435 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR2JP52435 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.34■□□□□ 0.53
POLR2JP52435 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2JP52435 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
POLR2JP52435 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2JP52435 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
POLR2JP52435 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
POLR2JP52435 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
POLR2JP52435 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2JP52435 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR2JP52435 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR2JP52435 DUSP5P2-201ENST00000426873 1033 ntBASIC18.34■□□□□ 0.53
POLR2JP52435 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
POLR2JP52435 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.34■□□□□ 0.53
POLR2JP52435 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2JP52435 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
POLR2JP52435 AL121906.2-201ENST00000621597 723 ntBASIC18.34■□□□□ 0.53
POLR2JP52435 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR2JP52435 AL390961.4-201ENST00000623958 2535 ntBASIC18.34■□□□□ 0.53
POLR2JP52435 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2JP52435 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2JP52435 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
POLR2JP52435 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR2JP52435 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
POLR2JP52435 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
POLR2JP52435 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
POLR2JP52435 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR2JP52435 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR2JP52435 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
POLR2JP52435 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR2JP52435 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
POLR2JP52435 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.33■□□□□ 0.53
POLR2JP52435 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR2JP52435 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR2JP52435 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
POLR2JP52435 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.33■□□□□ 0.53
POLR2JP52435 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
POLR2JP52435 FEM1AP3-201ENST00000403722 1741 ntBASIC18.33■□□□□ 0.52
POLR2JP52435 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.33■□□□□ 0.52
POLR2JP52435 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
POLR2JP52435 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.33■□□□□ 0.52
POLR2JP52435 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
POLR2JP52435 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.33■□□□□ 0.52
POLR2JP52435 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.33■□□□□ 0.52
POLR2JP52435 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR2JP52435 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms