Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLCN2P51788 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.56■□□□□ 0.56
CLCN2P51788 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 AC098590.1-201ENST00000468126 897 ntBASIC18.56■□□□□ 0.56
CLCN2P51788 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.56■□□□□ 0.56
CLCN2P51788 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 RN7SL471P-201ENST00000580476 299 ntBASIC18.56■□□□□ 0.56
CLCN2P51788 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
CLCN2P51788 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CLCN2P51788 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CLCN2P51788 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCN2P51788 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.56■□□□□ 0.56
CLCN2P51788 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
CLCN2P51788 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CLCN2P51788 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCN2P51788 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCN2P51788 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.55■□□□□ 0.56
CLCN2P51788 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 GCSHP5-201ENST00000443090 522 ntBASIC18.55■□□□□ 0.56
CLCN2P51788 RPS2P52-201ENST00000469610 820 ntBASIC18.55■□□□□ 0.56
CLCN2P51788 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CLCN2P51788 C1QBPP2-201ENST00000528754 825 ntBASIC18.55■□□□□ 0.56
CLCN2P51788 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CLCN2P51788 AC233263.1-201ENST00000578059 224 ntBASIC18.55■□□□□ 0.56
CLCN2P51788 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CLCN2P51788 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.55■□□□□ 0.56
CLCN2P51788 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.55■□□□□ 0.56
CLCN2P51788 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 KRT16P6-202ENST00000425692 1426 ntBASIC18.55■□□□□ 0.56
CLCN2P51788 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLCN2P51788 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN2P51788 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN2P51788 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN2P51788 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN2P51788 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN2P51788 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CLCN2P51788 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLCN2P51788 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN2P51788 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLCN2P51788 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN2P51788 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CLCN2P51788 AL158047.1-201ENST00000445918 881 ntBASIC18.54■□□□□ 0.56
CLCN2P51788 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN2P51788 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CLCN2P51788 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN2P51788 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.54■□□□□ 0.56
CLCN2P51788 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.54■□□□□ 0.56
CLCN2P51788 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN2P51788 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN2P51788 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN2P51788 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN2P51788 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLCN2P51788 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN2P51788 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.54■□□□□ 0.56
CLCN2P51788 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN2P51788 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CLCN2P51788 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLCN2P51788 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLCN2P51788 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN2P51788 AC009113.1-201ENST00000570267 2443 ntBASIC18.53■□□□□ 0.56
CLCN2P51788 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN2P51788 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN2P51788 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN2P51788 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN2P51788 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN2P51788 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN2P51788 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CLCN2P51788 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN2P51788 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCN2P51788 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN2P51788 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.53■□□□□ 0.56
CLCN2P51788 PRKY-204ENST00000533551 1019 ntBASIC18.53■□□□□ 0.56
CLCN2P51788 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCN2P51788 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.53■□□□□ 0.56
CLCN2P51788 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.53■□□□□ 0.56
CLCN2P51788 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLCN2P51788 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.53■□□□□ 0.56
CLCN2P51788 FAM197Y4-202ENST00000622692 608 ntBASIC18.53■□□□□ 0.56
CLCN2P51788 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.53■□□□□ 0.56
CLCN2P51788 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLCN2P51788 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLCN2P51788 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms