Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRP9P49458 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17■□□□□ 0.31
SRP9P49458 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRP9P49458 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRP9P49458 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SRP9P49458 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17■□□□□ 0.31
SRP9P49458 PTBP1P-201ENST00000554374 1601 ntBASIC16.99■□□□□ 0.31
SRP9P49458 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.99■□□□□ 0.31
SRP9P49458 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.99■□□□□ 0.31
SRP9P49458 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SRP9P49458 KRT16P6-202ENST00000425692 1426 ntBASIC16.99■□□□□ 0.31
SRP9P49458 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SRP9P49458 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.99■□□□□ 0.31
SRP9P49458 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.99■□□□□ 0.31
SRP9P49458 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.99■□□□□ 0.31
SRP9P49458 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.99■□□□□ 0.31
SRP9P49458 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.99■□□□□ 0.31
SRP9P49458 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
SRP9P49458 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.99■□□□□ 0.31
SRP9P49458 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SRP9P49458 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SRP9P49458 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.99■□□□□ 0.31
SRP9P49458 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.99■□□□□ 0.31
SRP9P49458 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.99■□□□□ 0.31
SRP9P49458 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRP9P49458 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.99■□□□□ 0.31
SRP9P49458 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.98■□□□□ 0.31
SRP9P49458 AC135050.7-201ENST00000624508 2218 ntBASIC16.98■□□□□ 0.31
SRP9P49458 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.98■□□□□ 0.31
SRP9P49458 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SRP9P49458 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.98■□□□□ 0.31
SRP9P49458 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SRP9P49458 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SRP9P49458 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.98■□□□□ 0.31
SRP9P49458 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.98■□□□□ 0.31
SRP9P49458 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SRP9P49458 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.98■□□□□ 0.31
SRP9P49458 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.98■□□□□ 0.31
SRP9P49458 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.98■□□□□ 0.31
SRP9P49458 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SRP9P49458 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.98■□□□□ 0.31
SRP9P49458 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.98■□□□□ 0.31
SRP9P49458 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SRP9P49458 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SRP9P49458 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.98■□□□□ 0.31
SRP9P49458 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SRP9P49458 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRP9P49458 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SRP9P49458 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SRP9P49458 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRP9P49458 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.97■□□□□ 0.31
SRP9P49458 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms