Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 YBX1P10-201ENST00000444752 975 ntBASIC17.57■□□□□ 0.4
SLC9A3P48764 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.57■□□□□ 0.4
SLC9A3P48764 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC9A3P48764 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC9A3P48764 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC9A3P48764 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC9A3P48764 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC9A3P48764 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC9A3P48764 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC9A3P48764 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLC9A3P48764 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC9A3P48764 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC9A3P48764 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC9A3P48764 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SLC9A3P48764 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.56■□□□□ 0.4
SLC9A3P48764 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC9A3P48764 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC9A3P48764 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC9A3P48764 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLC9A3P48764 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC9A3P48764 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC9A3P48764 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SLC9A3P48764 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 AP006587.1-201ENST00000534129 1502 ntBASIC17.56■□□□□ 0.4
SLC9A3P48764 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC9A3P48764 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC9A3P48764 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC9A3P48764 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC9A3P48764 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC9A3P48764 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC9A3P48764 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC9A3P48764 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC9A3P48764 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC9A3P48764 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC9A3P48764 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC9A3P48764 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC9A3P48764 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC9A3P48764 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.55■□□□□ 0.4
SLC9A3P48764 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC9A3P48764 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC9A3P48764 AC060766.5-201ENST00000590539 871 ntBASIC17.55■□□□□ 0.4
SLC9A3P48764 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.55■□□□□ 0.4
SLC9A3P48764 AC141586.3-201ENST00000562166 1838 ntBASIC17.55■□□□□ 0.4
SLC9A3P48764 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC9A3P48764 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC9A3P48764 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC9A3P48764 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC9A3P48764 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC9A3P48764 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC9A3P48764 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC9A3P48764 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC9A3P48764 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC9A3P48764 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC9A3P48764 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC9A3P48764 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC9A3P48764 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC9A3P48764 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SLC9A3P48764 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC9A3P48764 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC9A3P48764 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC9A3P48764 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC9A3P48764 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms