Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HADHAP40939 ZNF815P-204ENST00000434898 1737 ntBASIC19.41■□□□□ 0.7
HADHAP40939 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HADHAP40939 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
HADHAP40939 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HADHAP40939 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.41■□□□□ 0.7
HADHAP40939 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HADHAP40939 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HADHAP40939 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HADHAP40939 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.4■□□□□ 0.7
HADHAP40939 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.4■□□□□ 0.7
HADHAP40939 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HADHAP40939 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.4■□□□□ 0.7
HADHAP40939 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HADHAP40939 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.4■□□□□ 0.7
HADHAP40939 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.4■□□□□ 0.7
HADHAP40939 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HADHAP40939 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HADHAP40939 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HADHAP40939 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
HADHAP40939 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HADHAP40939 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HADHAP40939 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HADHAP40939 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HADHAP40939 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.39■□□□□ 0.69
HADHAP40939 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.39■□□□□ 0.69
HADHAP40939 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.39■□□□□ 0.69
HADHAP40939 C1QL1P1-201ENST00000568105 661 ntBASIC19.39■□□□□ 0.69
HADHAP40939 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.39■□□□□ 0.69
HADHAP40939 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.39■□□□□ 0.69
HADHAP40939 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HADHAP40939 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
HADHAP40939 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HADHAP40939 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HADHAP40939 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HADHAP40939 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HADHAP40939 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HADHAP40939 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HADHAP40939 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HADHAP40939 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HADHAP40939 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.38■□□□□ 0.69
HADHAP40939 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.38■□□□□ 0.69
HADHAP40939 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HADHAP40939 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.38■□□□□ 0.69
HADHAP40939 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HADHAP40939 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HADHAP40939 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.38■□□□□ 0.69
HADHAP40939 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 RPPH1-201ENST00000516869 333 ntBASIC19.38■□□□□ 0.69
HADHAP40939 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.38■□□□□ 0.69
HADHAP40939 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.38■□□□□ 0.69
HADHAP40939 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.38■□□□□ 0.69
HADHAP40939 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.38■□□□□ 0.69
HADHAP40939 AC141586.3-201ENST00000562166 1838 ntBASIC19.38■□□□□ 0.69
HADHAP40939 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.38■□□□□ 0.69
HADHAP40939 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.38■□□□□ 0.69
HADHAP40939 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HADHAP40939 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.37■□□□□ 0.69
HADHAP40939 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 AC093503.3-201ENST00000624917 2352 ntBASIC19.37■□□□□ 0.69
HADHAP40939 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HADHAP40939 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HADHAP40939 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms