Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.7■□□□□ 0.26
GDNFP39905 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.7■□□□□ 0.26
GDNFP39905 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.7■□□□□ 0.26
GDNFP39905 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.7■□□□□ 0.26
GDNFP39905 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.7■□□□□ 0.26
GDNFP39905 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.7■□□□□ 0.26
GDNFP39905 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 AC008694.1-202ENST00000636953 945 ntBASIC16.7■□□□□ 0.26
GDNFP39905 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.7■□□□□ 0.26
GDNFP39905 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.7■□□□□ 0.26
GDNFP39905 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GDNFP39905 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
GDNFP39905 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GDNFP39905 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.69■□□□□ 0.26
GDNFP39905 Z98044.1-201ENST00000632503 1764 ntBASIC16.69■□□□□ 0.26
GDNFP39905 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GDNFP39905 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.69■□□□□ 0.26
GDNFP39905 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 MCRIP2P1-201ENST00000394346 511 ntBASIC16.69■□□□□ 0.26
GDNFP39905 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.69■□□□□ 0.26
GDNFP39905 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.69■□□□□ 0.26
GDNFP39905 OR10C1-204ENST00000622521 1039 ntBASIC16.69■□□□□ 0.26
GDNFP39905 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GDNFP39905 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 AC010980.2-201ENST00000587099 1412 ntBASIC16.69■□□□□ 0.26
GDNFP39905 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
GDNFP39905 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GDNFP39905 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GDNFP39905 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 AC093525.10-201ENST00000625130 1569 ntBASIC16.68■□□□□ 0.26
GDNFP39905 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.68■□□□□ 0.26
GDNFP39905 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GDNFP39905 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.68■□□□□ 0.26
GDNFP39905 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
GDNFP39905 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GDNFP39905 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.68■□□□□ 0.26
GDNFP39905 AC100791.3-201ENST00000617619 330 ntBASIC16.68■□□□□ 0.26
GDNFP39905 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GDNFP39905 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
GDNFP39905 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.68■□□□□ 0.26
GDNFP39905 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
GDNFP39905 TEX21P-204ENST00000641479 1693 ntBASIC16.68■□□□□ 0.26
GDNFP39905 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GDNFP39905 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.68■□□□□ 0.26
GDNFP39905 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
GDNFP39905 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.67■□□□□ 0.26
GDNFP39905 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GDNFP39905 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
GDNFP39905 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.67■□□□□ 0.26
GDNFP39905 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.67■□□□□ 0.26
GDNFP39905 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
GDNFP39905 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GDNFP39905 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.67■□□□□ 0.26
GDNFP39905 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms