Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V1AP38606 AC024243.1-201ENST00000609234 778 ntBASIC24.48■■□□□ 1.51
ATP6V1AP38606 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.48■■□□□ 1.51
ATP6V1AP38606 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC24.48■■□□□ 1.51
ATP6V1AP38606 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V1AP38606 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V1AP38606 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
ATP6V1AP38606 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
ATP6V1AP38606 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.47■■□□□ 1.51
ATP6V1AP38606 AC104417.2-201ENST00000562989 1793 ntBASIC24.47■■□□□ 1.51
ATP6V1AP38606 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
ATP6V1AP38606 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC24.47■■□□□ 1.51
ATP6V1AP38606 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC24.47■■□□□ 1.51
ATP6V1AP38606 FDX1P1-201ENST00000449115 551 ntBASIC24.47■■□□□ 1.51
ATP6V1AP38606 BX276092.5-203ENST00000456199 560 ntBASIC24.47■■□□□ 1.51
ATP6V1AP38606 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC24.47■■□□□ 1.51
ATP6V1AP38606 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC24.47■■□□□ 1.51
ATP6V1AP38606 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.47■■□□□ 1.51
ATP6V1AP38606 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V1AP38606 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC24.46■■□□□ 1.51
ATP6V1AP38606 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V1AP38606 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.46■■□□□ 1.51
ATP6V1AP38606 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V1AP38606 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V1AP38606 AL391422.3-201ENST00000603791 2761 ntBASIC24.46■■□□□ 1.51
ATP6V1AP38606 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V1AP38606 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.46■■□□□ 1.51
ATP6V1AP38606 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V1AP38606 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V1AP38606 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC24.46■■□□□ 1.51
ATP6V1AP38606 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.46■■□□□ 1.51
ATP6V1AP38606 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC24.46■■□□□ 1.51
ATP6V1AP38606 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V1AP38606 AL121672.3-201ENST00000608644 468 ntBASIC24.46■■□□□ 1.51
ATP6V1AP38606 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC24.46■■□□□ 1.51
ATP6V1AP38606 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V1AP38606 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.46■■□□□ 1.51
ATP6V1AP38606 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
ATP6V1AP38606 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V1AP38606 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V1AP38606 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.45■■□□□ 1.51
ATP6V1AP38606 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
ATP6V1AP38606 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
ATP6V1AP38606 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
ATP6V1AP38606 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.51
ATP6V1AP38606 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
ATP6V1AP38606 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6V1AP38606 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
ATP6V1AP38606 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC24.45■■□□□ 1.5
ATP6V1AP38606 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC24.45■■□□□ 1.5
ATP6V1AP38606 UNC93B7-201ENST00000509439 705 ntBASIC24.45■■□□□ 1.5
ATP6V1AP38606 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
ATP6V1AP38606 GPAT2P1-201ENST00000444924 1672 ntBASIC24.45■■□□□ 1.5
ATP6V1AP38606 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6V1AP38606 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6V1AP38606 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6V1AP38606 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.45■■□□□ 1.5
ATP6V1AP38606 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
ATP6V1AP38606 PPIH-202ENST00000372549 327 ntTSL 3 BASIC24.44■■□□□ 1.5
ATP6V1AP38606 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC24.44■■□□□ 1.5
ATP6V1AP38606 AP002383.4-201ENST00000442518 975 ntBASIC24.44■■□□□ 1.5
ATP6V1AP38606 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC24.44■■□□□ 1.5
ATP6V1AP38606 AC111152.3-201ENST00000569699 673 ntBASIC24.44■■□□□ 1.5
ATP6V1AP38606 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC24.44■■□□□ 1.5
ATP6V1AP38606 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V1AP38606 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.43■■□□□ 1.5
ATP6V1AP38606 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.43■■□□□ 1.5
ATP6V1AP38606 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 AC004870.1-201ENST00000315132 882 ntBASIC24.43■■□□□ 1.5
ATP6V1AP38606 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V1AP38606 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC24.43■■□□□ 1.5
ATP6V1AP38606 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms