Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFC1P35251 BX323043.1-201ENST00000641006 1765 ntBASIC20.22■□□□□ 0.83
RFC1P35251 PRORSD1P-201ENST00000295112 541 ntBASIC20.22■□□□□ 0.83
RFC1P35251 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.22■□□□□ 0.83
RFC1P35251 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.22■□□□□ 0.83
RFC1P35251 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.22■□□□□ 0.83
RFC1P35251 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.22■□□□□ 0.83
RFC1P35251 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.22■□□□□ 0.83
RFC1P35251 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.22■□□□□ 0.83
RFC1P35251 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RFC1P35251 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFC1P35251 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.22■□□□□ 0.83
RFC1P35251 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC1P35251 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.21■□□□□ 0.83
RFC1P35251 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RFC1P35251 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFC1P35251 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFC1P35251 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
RFC1P35251 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.21■□□□□ 0.83
RFC1P35251 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC1P35251 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC1P35251 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFC1P35251 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RFC1P35251 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
RFC1P35251 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.21■□□□□ 0.83
RFC1P35251 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.21■□□□□ 0.83
RFC1P35251 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.21■□□□□ 0.83
RFC1P35251 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.21■□□□□ 0.83
RFC1P35251 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.21■□□□□ 0.83
RFC1P35251 AL359736.2-201ENST00000621992 437 ntBASIC20.21■□□□□ 0.83
RFC1P35251 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.21■□□□□ 0.83
RFC1P35251 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFC1P35251 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC1P35251 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFC1P35251 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFC1P35251 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
RFC1P35251 AL161938.1-201ENST00000569833 2180 ntBASIC20.21■□□□□ 0.83
RFC1P35251 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFC1P35251 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.21■□□□□ 0.83
RFC1P35251 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
RFC1P35251 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RFC1P35251 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RFC1P35251 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC1P35251 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC1P35251 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RFC1P35251 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RFC1P35251 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RFC1P35251 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC1P35251 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC1P35251 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.2■□□□□ 0.82
RFC1P35251 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.2■□□□□ 0.82
RFC1P35251 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC1P35251 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC1P35251 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.2■□□□□ 0.82
RFC1P35251 AL160286.2-201ENST00000567150 934 ntBASIC20.2■□□□□ 0.82
RFC1P35251 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.2■□□□□ 0.82
RFC1P35251 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RFC1P35251 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.2■□□□□ 0.82
RFC1P35251 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC1P35251 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC1P35251 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RFC1P35251 AL049812.1-201ENST00000432563 2267 ntBASIC20.2■□□□□ 0.82
RFC1P35251 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC1P35251 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
RFC1P35251 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFC1P35251 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
RFC1P35251 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
RFC1P35251 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.19■□□□□ 0.82
RFC1P35251 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC1P35251 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC1P35251 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC1P35251 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFC1P35251 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.19■□□□□ 0.82
RFC1P35251 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.19■□□□□ 0.82
RFC1P35251 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RFC1P35251 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.19■□□□□ 0.82
RFC1P35251 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.19■□□□□ 0.82
RFC1P35251 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
RFC1P35251 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFC1P35251 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFC1P35251 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFC1P35251 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFC1P35251 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFC1P35251 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RFC1P35251 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC1P35251 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC1P35251 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RFC1P35251 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
RFC1P35251 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.18■□□□□ 0.82
RFC1P35251 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC1P35251 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC1P35251 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC1P35251 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.18■□□□□ 0.82
RFC1P35251 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RFC1P35251 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC1P35251 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.18■□□□□ 0.82
RFC1P35251 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFC1P35251 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RFC1P35251 HTR7P1-201ENST00000538670 1336 ntBASIC20.18■□□□□ 0.82
RFC1P35251 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms