Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BCKDHBP21953 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
BCKDHBP21953 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BCKDHBP21953 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BCKDHBP21953 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BCKDHBP21953 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BCKDHBP21953 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.98■□□□□ 0.63
BCKDHBP21953 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
BCKDHBP21953 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.97■□□□□ 0.63
BCKDHBP21953 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.97■□□□□ 0.63
BCKDHBP21953 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.97■□□□□ 0.63
BCKDHBP21953 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.97■□□□□ 0.63
BCKDHBP21953 RN7SL510P-201ENST00000581311 263 ntBASIC18.97■□□□□ 0.63
BCKDHBP21953 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BCKDHBP21953 AC092329.2-201ENST00000598402 547 ntBASIC18.97■□□□□ 0.63
BCKDHBP21953 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.97■□□□□ 0.63
BCKDHBP21953 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.97■□□□□ 0.63
BCKDHBP21953 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BCKDHBP21953 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
BCKDHBP21953 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.97■□□□□ 0.63
BCKDHBP21953 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.96■□□□□ 0.63
BCKDHBP21953 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.96■□□□□ 0.63
BCKDHBP21953 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.96■□□□□ 0.63
BCKDHBP21953 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
BCKDHBP21953 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.96■□□□□ 0.63
BCKDHBP21953 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.96■□□□□ 0.63
BCKDHBP21953 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.96■□□□□ 0.63
BCKDHBP21953 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.96■□□□□ 0.63
BCKDHBP21953 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
BCKDHBP21953 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BCKDHBP21953 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.96■□□□□ 0.63
BCKDHBP21953 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.96■□□□□ 0.63
BCKDHBP21953 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.96■□□□□ 0.63
BCKDHBP21953 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
BCKDHBP21953 AP005212.1-201ENST00000581547 1997 ntBASIC18.95■□□□□ 0.62
BCKDHBP21953 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BCKDHBP21953 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.95■□□□□ 0.62
BCKDHBP21953 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 AL512408.1-201ENST00000569378 2000 ntBASIC18.95■□□□□ 0.62
BCKDHBP21953 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
BCKDHBP21953 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 AC073314.1-201ENST00000568729 2216 ntBASIC18.95■□□□□ 0.62
BCKDHBP21953 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BCKDHBP21953 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.95■□□□□ 0.62
BCKDHBP21953 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 AL391422.3-201ENST00000603791 2761 ntBASIC18.95■□□□□ 0.62
BCKDHBP21953 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
BCKDHBP21953 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BCKDHBP21953 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BCKDHBP21953 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.94■□□□□ 0.62
BCKDHBP21953 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BCKDHBP21953 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BCKDHBP21953 AL845331.1-201ENST00000424978 1190 ntBASIC18.94■□□□□ 0.62
BCKDHBP21953 TSSC2-201ENST00000450217 709 ntBASIC18.94■□□□□ 0.62
BCKDHBP21953 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.94■□□□□ 0.62
BCKDHBP21953 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.94■□□□□ 0.62
BCKDHBP21953 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
BCKDHBP21953 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.94■□□□□ 0.62
BCKDHBP21953 MIR3180-1-201ENST00000580374 94 ntBASIC18.94■□□□□ 0.62
BCKDHBP21953 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.94■□□□□ 0.62
BCKDHBP21953 MIR3180-3-201ENST00000584616 94 ntBASIC18.94■□□□□ 0.62
BCKDHBP21953 AC024243.1-201ENST00000609234 778 ntBASIC18.94■□□□□ 0.62
BCKDHBP21953 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
BCKDHBP21953 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BCKDHBP21953 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.94■□□□□ 0.62
BCKDHBP21953 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BCKDHBP21953 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
BCKDHBP21953 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms