Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.07■□□□□ 0.96
ITGA4P13612 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.07■□□□□ 0.96
ITGA4P13612 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.07■□□□□ 0.96
ITGA4P13612 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.07■□□□□ 0.96
ITGA4P13612 AL160286.2-201ENST00000567150 934 ntBASIC21.07■□□□□ 0.96
ITGA4P13612 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.07■□□□□ 0.96
ITGA4P13612 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ITGA4P13612 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ITGA4P13612 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ITGA4P13612 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ITGA4P13612 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
ITGA4P13612 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.07■□□□□ 0.96
ITGA4P13612 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
ITGA4P13612 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ITGA4P13612 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ITGA4P13612 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.06■□□□□ 0.96
ITGA4P13612 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ITGA4P13612 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ITGA4P13612 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ITGA4P13612 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.06■□□□□ 0.96
ITGA4P13612 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.06■□□□□ 0.96
ITGA4P13612 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ITGA4P13612 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.06■□□□□ 0.96
ITGA4P13612 AC005521.1-201ENST00000393351 872 ntBASIC21.06■□□□□ 0.96
ITGA4P13612 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ITGA4P13612 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.06■□□□□ 0.96
ITGA4P13612 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.06■□□□□ 0.96
ITGA4P13612 Z85996.1-201ENST00000494644 937 ntBASIC21.06■□□□□ 0.96
ITGA4P13612 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.06■□□□□ 0.96
ITGA4P13612 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.06■□□□□ 0.96
ITGA4P13612 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ITGA4P13612 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ITGA4P13612 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ITGA4P13612 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.06■□□□□ 0.96
ITGA4P13612 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ITGA4P13612 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ITGA4P13612 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ITGA4P13612 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITGA4P13612 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ITGA4P13612 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITGA4P13612 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITGA4P13612 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ITGA4P13612 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITGA4P13612 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.05■□□□□ 0.96
ITGA4P13612 AC113347.1-201ENST00000413321 391 ntBASIC21.05■□□□□ 0.96
ITGA4P13612 AC091390.4-202ENST00000476426 537 ntBASIC21.05■□□□□ 0.96
ITGA4P13612 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.05■□□□□ 0.96
ITGA4P13612 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ITGA4P13612 AC092865.7-201ENST00000641832 219 ntBASIC21.05■□□□□ 0.96
ITGA4P13612 AC018445.3-201ENST00000624177 1945 ntBASIC21.05■□□□□ 0.96
ITGA4P13612 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.05■□□□□ 0.96
ITGA4P13612 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITGA4P13612 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ITGA4P13612 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITGA4P13612 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.05■□□□□ 0.96
ITGA4P13612 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ITGA4P13612 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITGA4P13612 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITGA4P13612 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITGA4P13612 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.04■□□□□ 0.96
ITGA4P13612 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.04■□□□□ 0.96
ITGA4P13612 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ITGA4P13612 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.04■□□□□ 0.96
ITGA4P13612 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.04■□□□□ 0.96
ITGA4P13612 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.04■□□□□ 0.96
ITGA4P13612 EGLN1P1-201ENST00000531623 762 ntBASIC21.04■□□□□ 0.96
ITGA4P13612 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ITGA4P13612 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
ITGA4P13612 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ITGA4P13612 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.04■□□□□ 0.96
ITGA4P13612 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ITGA4P13612 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITGA4P13612 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ITGA4P13612 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.04■□□□□ 0.96
ITGA4P13612 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITGA4P13612 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
ITGA4P13612 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITGA4P13612 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITGA4P13612 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.04■□□□□ 0.96
ITGA4P13612 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGA4P13612 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGA4P13612 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGA4P13612 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ITGA4P13612 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGA4P13612 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITGA4P13612 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.03■□□□□ 0.96
ITGA4P13612 AL137013.1-201ENST00000432946 1228 ntBASIC21.03■□□□□ 0.96
ITGA4P13612 SLC25A3P1-201ENST00000443844 931 ntBASIC21.03■□□□□ 0.96
ITGA4P13612 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.03■□□□□ 0.96
ITGA4P13612 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ITGA4P13612 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ITGA4P13612 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.03■□□□□ 0.96
ITGA4P13612 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ITGA4P13612 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.03■□□□□ 0.96
ITGA4P13612 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ITGA4P13612 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ITGA4P13612 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.02■□□□□ 0.96
ITGA4P13612 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITGA4P13612 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.02■□□□□ 0.96
ITGA4P13612 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms