Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.97■□□□□ 0.63
COL6A2P12110 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.97■□□□□ 0.63
COL6A2P12110 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.97■□□□□ 0.63
COL6A2P12110 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.97■□□□□ 0.63
COL6A2P12110 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.97■□□□□ 0.63
COL6A2P12110 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
COL6A2P12110 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
COL6A2P12110 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL6A2P12110 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL6A2P12110 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL6A2P12110 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL6A2P12110 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL6A2P12110 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL6A2P12110 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL6A2P12110 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.96■□□□□ 0.63
COL6A2P12110 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.96■□□□□ 0.63
COL6A2P12110 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.96■□□□□ 0.63
COL6A2P12110 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COL6A2P12110 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
COL6A2P12110 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.96■□□□□ 0.63
COL6A2P12110 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL6A2P12110 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
COL6A2P12110 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.96■□□□□ 0.63
COL6A2P12110 AIRN-201ENST00000601203 4374 ntBASIC18.96■□□□□ 0.63
COL6A2P12110 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL6A2P12110 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
COL6A2P12110 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.96■□□□□ 0.63
COL6A2P12110 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.95■□□□□ 0.62
COL6A2P12110 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL6A2P12110 AL512353.2-201ENST00000448759 1962 ntBASIC18.95■□□□□ 0.62
COL6A2P12110 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.95■□□□□ 0.62
COL6A2P12110 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL6A2P12110 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.95■□□□□ 0.62
COL6A2P12110 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.95■□□□□ 0.62
COL6A2P12110 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.95■□□□□ 0.62
COL6A2P12110 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL6A2P12110 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.95■□□□□ 0.62
COL6A2P12110 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL6A2P12110 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL6A2P12110 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.95■□□□□ 0.62
COL6A2P12110 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.95■□□□□ 0.62
COL6A2P12110 AC008687.6-201ENST00000596318 630 ntBASIC18.95■□□□□ 0.62
COL6A2P12110 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.95■□□□□ 0.62
COL6A2P12110 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.95■□□□□ 0.62
COL6A2P12110 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL6A2P12110 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL6A2P12110 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL6A2P12110 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL6A2P12110 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL6A2P12110 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
COL6A2P12110 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL6A2P12110 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL6A2P12110 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.94■□□□□ 0.62
COL6A2P12110 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
COL6A2P12110 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.94■□□□□ 0.62
COL6A2P12110 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.94■□□□□ 0.62
COL6A2P12110 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.94■□□□□ 0.62
COL6A2P12110 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.94■□□□□ 0.62
COL6A2P12110 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.94■□□□□ 0.62
COL6A2P12110 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.94■□□□□ 0.62
COL6A2P12110 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
COL6A2P12110 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COL6A2P12110 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COL6A2P12110 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COL6A2P12110 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.93■□□□□ 0.62
COL6A2P12110 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.93■□□□□ 0.62
COL6A2P12110 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.93■□□□□ 0.62
COL6A2P12110 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.93■□□□□ 0.62
COL6A2P12110 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.93■□□□□ 0.62
COL6A2P12110 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
COL6A2P12110 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.93■□□□□ 0.62
COL6A2P12110 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.93■□□□□ 0.62
COL6A2P12110 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COL6A2P12110 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.93■□□□□ 0.62
COL6A2P12110 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms