Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.24■□□□□ 0.67
THRAP10827 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THRAP10827 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THRAP10827 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THRAP10827 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THRAP10827 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.24■□□□□ 0.67
THRAP10827 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
THRAP10827 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
THRAP10827 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.24■□□□□ 0.67
THRAP10827 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THRAP10827 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THRAP10827 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.24■□□□□ 0.67
THRAP10827 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
THRAP10827 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THRAP10827 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.24■□□□□ 0.67
THRAP10827 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.24■□□□□ 0.67
THRAP10827 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THRAP10827 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THRAP10827 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
THRAP10827 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.23■□□□□ 0.67
THRAP10827 AC009237.14-201ENST00000609975 1594 ntBASIC19.23■□□□□ 0.67
THRAP10827 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THRAP10827 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
THRAP10827 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THRAP10827 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THRAP10827 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
THRAP10827 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
THRAP10827 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.23■□□□□ 0.67
THRAP10827 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.23■□□□□ 0.67
THRAP10827 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
THRAP10827 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THRAP10827 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THRAP10827 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THRAP10827 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.23■□□□□ 0.67
THRAP10827 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.23■□□□□ 0.67
THRAP10827 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
THRAP10827 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.23■□□□□ 0.67
THRAP10827 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
THRAP10827 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
THRAP10827 AL121906.2-201ENST00000621597 723 ntBASIC19.23■□□□□ 0.67
THRAP10827 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
THRAP10827 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THRAP10827 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.23■□□□□ 0.67
THRAP10827 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.23■□□□□ 0.67
THRAP10827 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THRAP10827 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.23■□□□□ 0.67
THRAP10827 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
THRAP10827 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THRAP10827 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.23■□□□□ 0.67
THRAP10827 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
THRAP10827 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.22■□□□□ 0.67
THRAP10827 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.22■□□□□ 0.67
THRAP10827 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.22■□□□□ 0.67
THRAP10827 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.22■□□□□ 0.67
THRAP10827 BX088651.1-201ENST00000540551 451 ntBASIC19.22■□□□□ 0.67
THRAP10827 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.22■□□□□ 0.67
THRAP10827 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.22■□□□□ 0.67
THRAP10827 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
THRAP10827 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.22■□□□□ 0.67
THRAP10827 REXO1L12P-201ENST00000622156 912 ntBASIC19.22■□□□□ 0.67
THRAP10827 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.22■□□□□ 0.67
THRAP10827 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.22■□□□□ 0.67
THRAP10827 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
THRAP10827 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
THRAP10827 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
THRAP10827 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
THRAP10827 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.22■□□□□ 0.67
THRAP10827 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 PTBP1P-201ENST00000554374 1601 ntBASIC19.22■□□□□ 0.67
THRAP10827 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THRAP10827 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THRAP10827 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
THRAP10827 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.21■□□□□ 0.67
THRAP10827 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THRAP10827 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THRAP10827 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.21■□□□□ 0.67
THRAP10827 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THRAP10827 AL032819.2-201ENST00000624543 2162 ntBASIC19.21■□□□□ 0.67
THRAP10827 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
THRAP10827 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
THRAP10827 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.21■□□□□ 0.67
THRAP10827 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
THRAP10827 LINC01465-201ENST00000408887 1940 ntBASIC19.21■□□□□ 0.67
THRAP10827 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.21■□□□□ 0.67
THRAP10827 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THRAP10827 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.21■□□□□ 0.67
THRAP10827 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THRAP10827 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms