Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOBP04114 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
APOBP04114 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOBP04114 AC022898.2-201ENST00000616822 1312 ntBASIC12□□□□□ -0.49
APOBP04114 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC11.99□□□□□ -0.49
APOBP04114 GAD2-202ENST00000376248 680 ntTSL 5 BASIC11.99□□□□□ -0.49
APOBP04114 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.99□□□□□ -0.49
APOBP04114 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.99□□□□□ -0.49
APOBP04114 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
APOBP04114 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC11.99□□□□□ -0.49
APOBP04114 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC11.99□□□□□ -0.49
APOBP04114 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC11.99□□□□□ -0.49
APOBP04114 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC11.99□□□□□ -0.49
APOBP04114 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
APOBP04114 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.99□□□□□ -0.49
APOBP04114 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
APOBP04114 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
APOBP04114 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 Z83836.1-201ENST00000624605 1642 ntBASIC11.99□□□□□ -0.49
APOBP04114 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.99□□□□□ -0.49
APOBP04114 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
APOBP04114 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.99□□□□□ -0.49
APOBP04114 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
APOBP04114 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
APOBP04114 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC11.99□□□□□ -0.49
APOBP04114 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.99□□□□□ -0.49
APOBP04114 IGHV3-47-201ENST00000425060 335 ntBASIC11.99□□□□□ -0.49
APOBP04114 KRT16P6-202ENST00000425692 1426 ntBASIC11.99□□□□□ -0.49
APOBP04114 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.99□□□□□ -0.49
APOBP04114 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.99□□□□□ -0.49
APOBP04114 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC11.99□□□□□ -0.49
APOBP04114 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.99□□□□□ -0.49
APOBP04114 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOBP04114 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC11.98□□□□□ -0.49
APOBP04114 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.98□□□□□ -0.49
APOBP04114 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.98□□□□□ -0.49
APOBP04114 MIR7706-201ENST00000613747 67 ntBASIC11.98□□□□□ -0.49
APOBP04114 AC055717.3-201ENST00000622967 595 ntBASIC11.98□□□□□ -0.49
APOBP04114 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.98□□□□□ -0.49
APOBP04114 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 MOK-225ENST00000522867 1883 ntTSL 5 BASIC11.98□□□□□ -0.49
APOBP04114 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
APOBP04114 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.98□□□□□ -0.49
APOBP04114 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC11.98□□□□□ -0.49
APOBP04114 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.98□□□□□ -0.49
APOBP04114 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC11.98□□□□□ -0.49
APOBP04114 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC11.98□□□□□ -0.49
APOBP04114 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC11.98□□□□□ -0.49
APOBP04114 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.98□□□□□ -0.49
APOBP04114 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.98□□□□□ -0.49
APOBP04114 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.98□□□□□ -0.49
APOBP04114 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.98□□□□□ -0.49
APOBP04114 AL355385.1-201ENST00000606123 409 ntBASIC11.98□□□□□ -0.49
APOBP04114 AL353801.3-201ENST00000609898 542 ntBASIC11.98□□□□□ -0.49
APOBP04114 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 AL391807.1-203ENST00000604392 2365 ntBASIC11.98□□□□□ -0.49
APOBP04114 AC006128.1-201ENST00000624704 1661 ntBASIC11.98□□□□□ -0.49
APOBP04114 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
APOBP04114 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.98□□□□□ -0.49
APOBP04114 PGAM5P1-201ENST00000518923 814 ntBASIC11.98□□□□□ -0.49
APOBP04114 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOBP04114 AC092865.5-201ENST00000545435 363 ntBASIC11.98□□□□□ -0.49
APOBP04114 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
APOBP04114 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOBP04114 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.97□□□□□ -0.49
APOBP04114 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC11.97□□□□□ -0.49
APOBP04114 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms