Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
C4BPAP04003 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4BPAP04003 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4BPAP04003 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4BPAP04003 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4BPAP04003 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C4BPAP04003 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C4BPAP04003 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
C4BPAP04003 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.63■□□□□ 0.89
C4BPAP04003 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.63■□□□□ 0.89
C4BPAP04003 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C4BPAP04003 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.63■□□□□ 0.89
C4BPAP04003 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C4BPAP04003 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.63■□□□□ 0.89
C4BPAP04003 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.63■□□□□ 0.89
C4BPAP04003 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.63■□□□□ 0.89
C4BPAP04003 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4BPAP04003 AL161938.1-201ENST00000569833 2180 ntBASIC20.63■□□□□ 0.89
C4BPAP04003 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4BPAP04003 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.63■□□□□ 0.89
C4BPAP04003 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
C4BPAP04003 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.63■□□□□ 0.89
C4BPAP04003 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.63■□□□□ 0.89
C4BPAP04003 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C4BPAP04003 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4BPAP04003 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.62■□□□□ 0.89
C4BPAP04003 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.62■□□□□ 0.89
C4BPAP04003 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4BPAP04003 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4BPAP04003 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4BPAP04003 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
C4BPAP04003 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
C4BPAP04003 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.62■□□□□ 0.89
C4BPAP04003 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4BPAP04003 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.62■□□□□ 0.89
C4BPAP04003 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.62■□□□□ 0.89
C4BPAP04003 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4BPAP04003 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
C4BPAP04003 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4BPAP04003 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.62■□□□□ 0.89
C4BPAP04003 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4BPAP04003 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
C4BPAP04003 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.61■□□□□ 0.89
C4BPAP04003 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.61■□□□□ 0.89
C4BPAP04003 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
C4BPAP04003 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 FP475955.4-201ENST00000623131 1990 ntBASIC20.61■□□□□ 0.89
C4BPAP04003 KRT17P2-201ENST00000300992 1314 ntBASIC20.61■□□□□ 0.89
C4BPAP04003 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
C4BPAP04003 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
C4BPAP04003 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
C4BPAP04003 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.61■□□□□ 0.89
C4BPAP04003 TSPY15P-201ENST00000457163 923 ntBASIC20.61■□□□□ 0.89
C4BPAP04003 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.61■□□□□ 0.89
C4BPAP04003 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.61■□□□□ 0.89
C4BPAP04003 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.61■□□□□ 0.89
C4BPAP04003 DGCR10-201ENST00000609839 495 ntBASIC20.61■□□□□ 0.89
C4BPAP04003 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
C4BPAP04003 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
C4BPAP04003 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
C4BPAP04003 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C4BPAP04003 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.6■□□□□ 0.89
C4BPAP04003 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.6■□□□□ 0.89
C4BPAP04003 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
C4BPAP04003 RBM17P1-201ENST00000453646 1190 ntBASIC20.6■□□□□ 0.89
C4BPAP04003 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
C4BPAP04003 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.6■□□□□ 0.89
C4BPAP04003 PRSS44-201ENST00000515154 1146 ntBASIC20.6■□□□□ 0.89
C4BPAP04003 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.6■□□□□ 0.89
C4BPAP04003 AL355075.4-201ENST00000554988 638 ntBASIC20.6■□□□□ 0.89
C4BPAP04003 CKBP1-201ENST00000565489 1086 ntBASIC20.6■□□□□ 0.89
C4BPAP04003 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
C4BPAP04003 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.6■□□□□ 0.89
C4BPAP04003 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
C4BPAP04003 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C4BPAP04003 AL049812.1-201ENST00000432563 2267 ntBASIC20.6■□□□□ 0.89
C4BPAP04003 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C4BPAP04003 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C4BPAP04003 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms