Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA1P02708 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CHRNA1P02708 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHRNA1P02708 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA1P02708 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CHRNA1P02708 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA1P02708 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA1P02708 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA1P02708 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA1P02708 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA1P02708 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA1P02708 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA1P02708 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.9■□□□□ 0.94
CHRNA1P02708 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.9■□□□□ 0.94
CHRNA1P02708 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.9■□□□□ 0.94
CHRNA1P02708 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA1P02708 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.9■□□□□ 0.94
CHRNA1P02708 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA1P02708 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA1P02708 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA1P02708 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CHRNA1P02708 AL157384.1-201ENST00000445995 2473 ntBASIC20.89■□□□□ 0.94
CHRNA1P02708 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.89■□□□□ 0.94
CHRNA1P02708 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHRNA1P02708 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA1P02708 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA1P02708 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA1P02708 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.89■□□□□ 0.93
CHRNA1P02708 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.89■□□□□ 0.93
CHRNA1P02708 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 AC093458.2-201ENST00000623150 629 ntBASIC20.89■□□□□ 0.93
CHRNA1P02708 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
CHRNA1P02708 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.89■□□□□ 0.93
CHRNA1P02708 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.89■□□□□ 0.93
CHRNA1P02708 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA1P02708 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNA1P02708 SPDYE15P-201ENST00000424157 909 ntBASIC20.88■□□□□ 0.93
CHRNA1P02708 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHRNA1P02708 VENTXP5-201ENST00000523979 775 ntBASIC20.88■□□□□ 0.93
CHRNA1P02708 ZNF444P1-201ENST00000559497 298 ntBASIC20.88■□□□□ 0.93
CHRNA1P02708 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNA1P02708 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.88■□□□□ 0.93
CHRNA1P02708 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNA1P02708 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA1P02708 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA1P02708 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA1P02708 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA1P02708 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNA1P02708 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA1P02708 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.87■□□□□ 0.93
CHRNA1P02708 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA1P02708 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
CHRNA1P02708 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA1P02708 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA1P02708 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA1P02708 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA1P02708 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA1P02708 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA1P02708 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNA1P02708 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNA1P02708 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.86■□□□□ 0.93
CHRNA1P02708 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.86■□□□□ 0.93
CHRNA1P02708 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA1P02708 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms