Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.21■□□□□ 0.99
CD4P01730 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.21■□□□□ 0.99
CD4P01730 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.21■□□□□ 0.99
CD4P01730 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CD4P01730 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CD4P01730 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.21■□□□□ 0.99
CD4P01730 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.21■□□□□ 0.99
CD4P01730 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.21■□□□□ 0.99
CD4P01730 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD4P01730 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CD4P01730 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CD4P01730 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD4P01730 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CD4P01730 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD4P01730 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD4P01730 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CD4P01730 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
CD4P01730 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CD4P01730 TSPY21P-201ENST00000433481 731 ntBASIC21.2■□□□□ 0.98
CD4P01730 TSPY23P-201ENST00000440136 739 ntBASIC21.2■□□□□ 0.98
CD4P01730 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.2■□□□□ 0.98
CD4P01730 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD4P01730 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.2■□□□□ 0.98
CD4P01730 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.2■□□□□ 0.98
CD4P01730 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CD4P01730 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.2■□□□□ 0.98
CD4P01730 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.2■□□□□ 0.98
CD4P01730 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.2■□□□□ 0.98
CD4P01730 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.2■□□□□ 0.98
CD4P01730 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CD4P01730 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CD4P01730 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD4P01730 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.2■□□□□ 0.98
CD4P01730 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CD4P01730 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.2■□□□□ 0.98
CD4P01730 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CD4P01730 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD4P01730 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD4P01730 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.19■□□□□ 0.98
CD4P01730 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.19■□□□□ 0.98
CD4P01730 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.19■□□□□ 0.98
CD4P01730 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.19■□□□□ 0.98
CD4P01730 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.19■□□□□ 0.98
CD4P01730 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.19■□□□□ 0.98
CD4P01730 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD4P01730 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CD4P01730 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.19■□□□□ 0.98
CD4P01730 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD4P01730 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.19■□□□□ 0.98
CD4P01730 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.19■□□□□ 0.98
CD4P01730 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD4P01730 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD4P01730 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD4P01730 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD4P01730 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD4P01730 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CD4P01730 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CD4P01730 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD4P01730 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD4P01730 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.19■□□□□ 0.98
CD4P01730 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.18■□□□□ 0.98
CD4P01730 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.18■□□□□ 0.98
CD4P01730 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CD4P01730 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.18■□□□□ 0.98
CD4P01730 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.18■□□□□ 0.98
CD4P01730 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.18■□□□□ 0.98
CD4P01730 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD4P01730 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CD4P01730 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD4P01730 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CD4P01730 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD4P01730 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD4P01730 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD4P01730 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD4P01730 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CD4P01730 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD4P01730 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD4P01730 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD4P01730 AC099778.1-201ENST00000568593 1911 ntBASIC21.17■□□□□ 0.98
CD4P01730 AL691432.2-201ENST00000607222 2038 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms