Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
GGPS1O95749 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.55■■□□□ 1.04
GGPS1O95749 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
GGPS1O95749 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
GGPS1O95749 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.55■■□□□ 1.04
GGPS1O95749 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.55■■□□□ 1.04
GGPS1O95749 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 AC022616.7-201ENST00000525383 220 ntBASIC21.55■■□□□ 1.04
GGPS1O95749 AC087388.1-201ENST00000571370 1112 ntBASIC21.55■■□□□ 1.04
GGPS1O95749 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
GGPS1O95749 AC141257.4-201ENST00000634557 245 ntBASIC21.55■■□□□ 1.04
GGPS1O95749 AC136944.6-201ENST00000634818 245 ntBASIC21.55■■□□□ 1.04
GGPS1O95749 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
GGPS1O95749 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
GGPS1O95749 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.55■■□□□ 1.04
GGPS1O95749 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.55■■□□□ 1.04
GGPS1O95749 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GGPS1O95749 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.54■■□□□ 1.04
GGPS1O95749 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.54■■□□□ 1.04
GGPS1O95749 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.54■■□□□ 1.04
GGPS1O95749 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.54■■□□□ 1.04
GGPS1O95749 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.54■■□□□ 1.04
GGPS1O95749 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
GGPS1O95749 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.54■■□□□ 1.04
GGPS1O95749 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.54■■□□□ 1.04
GGPS1O95749 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.54■■□□□ 1.04
GGPS1O95749 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 YBX1P2-201ENST00000489612 999 ntBASIC21.54■■□□□ 1.04
GGPS1O95749 AC063952.2-201ENST00000498792 1227 ntBASIC21.54■■□□□ 1.04
GGPS1O95749 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.54■■□□□ 1.04
GGPS1O95749 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
GGPS1O95749 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.54■■□□□ 1.04
GGPS1O95749 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
GGPS1O95749 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.54■■□□□ 1.04
GGPS1O95749 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.54■■□□□ 1.04
GGPS1O95749 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.54■■□□□ 1.04
GGPS1O95749 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GGPS1O95749 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GGPS1O95749 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GGPS1O95749 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
GGPS1O95749 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
GGPS1O95749 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GGPS1O95749 COX11P1-201ENST00000489116 835 ntBASIC21.53■■□□□ 1.04
GGPS1O95749 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.53■■□□□ 1.04
GGPS1O95749 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GGPS1O95749 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.53■■□□□ 1.04
GGPS1O95749 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GGPS1O95749 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
GGPS1O95749 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GGPS1O95749 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GGPS1O95749 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.52■■□□□ 1.04
GGPS1O95749 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
GGPS1O95749 RNF152P1-201ENST00000397754 604 ntBASIC21.52■■□□□ 1.04
GGPS1O95749 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.52■■□□□ 1.04
GGPS1O95749 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
GGPS1O95749 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
GGPS1O95749 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
GGPS1O95749 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GGPS1O95749 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.52■■□□□ 1.04
GGPS1O95749 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GGPS1O95749 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GGPS1O95749 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
GGPS1O95749 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GGPS1O95749 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
GGPS1O95749 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
GGPS1O95749 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
GGPS1O95749 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
GGPS1O95749 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GGPS1O95749 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms