Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 REXO1L12P-201ENST00000622156 912 ntBASIC18.59■□□□□ 0.57
CNOT3O75175 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CNOT3O75175 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT3O75175 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT3O75175 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT3O75175 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.59■□□□□ 0.57
CNOT3O75175 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CNOT3O75175 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.58■□□□□ 0.57
CNOT3O75175 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.58■□□□□ 0.57
CNOT3O75175 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT3O75175 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT3O75175 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT3O75175 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT3O75175 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CNOT3O75175 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT3O75175 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.58■□□□□ 0.57
CNOT3O75175 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.58■□□□□ 0.57
CNOT3O75175 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT3O75175 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CNOT3O75175 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CNOT3O75175 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.58■□□□□ 0.56
CNOT3O75175 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT3O75175 ECEL1P3-201ENST00000427961 737 ntBASIC18.58■□□□□ 0.56
CNOT3O75175 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.58■□□□□ 0.56
CNOT3O75175 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT3O75175 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CNOT3O75175 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.58■□□□□ 0.56
CNOT3O75175 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.58■□□□□ 0.56
CNOT3O75175 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.58■□□□□ 0.56
CNOT3O75175 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.58■□□□□ 0.56
CNOT3O75175 AC026471.5-201ENST00000615068 467 ntBASIC18.58■□□□□ 0.56
CNOT3O75175 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
CNOT3O75175 TFP1-202ENST00000475455 1573 ntBASIC18.58■□□□□ 0.56
CNOT3O75175 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.58■□□□□ 0.56
CNOT3O75175 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 KRT16P6-202ENST00000425692 1426 ntBASIC18.57■□□□□ 0.56
CNOT3O75175 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT3O75175 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.57■□□□□ 0.56
CNOT3O75175 AC116562.4-201ENST00000641316 2276 ntBASIC18.57■□□□□ 0.56
CNOT3O75175 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CNOT3O75175 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CNOT3O75175 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.57■□□□□ 0.56
CNOT3O75175 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 AC211429.1-201ENST00000415277 523 ntBASIC18.57■□□□□ 0.56
CNOT3O75175 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.57■□□□□ 0.56
CNOT3O75175 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT3O75175 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT3O75175 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT3O75175 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT3O75175 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.57■□□□□ 0.56
CNOT3O75175 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT3O75175 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CNOT3O75175 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT3O75175 AC018553.1-201ENST00000616682 1458 ntBASIC18.57■□□□□ 0.56
CNOT3O75175 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 LTB4R2-202ENST00000528054 3092 ntBASIC18.57■□□□□ 0.56
CNOT3O75175 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CNOT3O75175 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CNOT3O75175 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT3O75175 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CNOT3O75175 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 AL353807.1-201ENST00000427475 662 ntBASIC18.56■□□□□ 0.56
CNOT3O75175 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT3O75175 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.56■□□□□ 0.56
CNOT3O75175 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.56■□□□□ 0.56
CNOT3O75175 AP003071.4-201ENST00000562276 1284 ntBASIC18.56■□□□□ 0.56
CNOT3O75175 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT3O75175 AC073195.1-201ENST00000607241 877 ntBASIC18.56■□□□□ 0.56
CNOT3O75175 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CNOT3O75175 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.56■□□□□ 0.56
CNOT3O75175 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CNOT3O75175 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT3O75175 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.56■□□□□ 0.56
CNOT3O75175 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.56■□□□□ 0.56
CNOT3O75175 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT3O75175 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms