Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP2O43734 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP2O43734 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.09■□□□□ 0.33
TRAF3IP2O43734 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 AC073195.1-201ENST00000607241 877 ntBASIC17.09■□□□□ 0.33
TRAF3IP2O43734 AC131212.4-201ENST00000623606 975 ntBASIC17.09■□□□□ 0.33
TRAF3IP2O43734 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 KRT16P1-201ENST00000399124 1418 ntBASIC17.09■□□□□ 0.33
TRAF3IP2O43734 AL135905.2-201ENST00000584934 1404 ntBASIC17.09■□□□□ 0.33
TRAF3IP2O43734 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 AL161938.1-201ENST00000569833 2180 ntBASIC17.09■□□□□ 0.33
TRAF3IP2O43734 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP2O43734 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF3IP2O43734 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF3IP2O43734 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAF3IP2O43734 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF3IP2O43734 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF3IP2O43734 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAF3IP2O43734 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAF3IP2O43734 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF3IP2O43734 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF3IP2O43734 AC018445.3-201ENST00000624177 1945 ntBASIC17.08■□□□□ 0.33
TRAF3IP2O43734 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF3IP2O43734 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.08■□□□□ 0.32
TRAF3IP2O43734 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAF3IP2O43734 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 BX323043.1-201ENST00000641006 1765 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms