Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PHGDHO43175 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PHGDHO43175 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 IRX1P1-201ENST00000438849 1838 ntBASIC19.09■□□□□ 0.65
PHGDHO43175 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.09■□□□□ 0.65
PHGDHO43175 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PHGDHO43175 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.09■□□□□ 0.65
PHGDHO43175 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PHGDHO43175 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PHGDHO43175 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PHGDHO43175 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PHGDHO43175 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PHGDHO43175 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PHGDHO43175 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
PHGDHO43175 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PHGDHO43175 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.08■□□□□ 0.65
PHGDHO43175 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PHGDHO43175 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PHGDHO43175 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PHGDHO43175 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHGDHO43175 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.08■□□□□ 0.64
PHGDHO43175 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.08■□□□□ 0.64
PHGDHO43175 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.08■□□□□ 0.64
PHGDHO43175 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PHGDHO43175 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PHGDHO43175 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.08■□□□□ 0.64
PHGDHO43175 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.08■□□□□ 0.64
PHGDHO43175 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PHGDHO43175 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHGDHO43175 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHGDHO43175 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHGDHO43175 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.08■□□□□ 0.64
PHGDHO43175 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHGDHO43175 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHGDHO43175 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHGDHO43175 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHGDHO43175 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHGDHO43175 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.08■□□□□ 0.64
PHGDHO43175 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.08■□□□□ 0.64
PHGDHO43175 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.08■□□□□ 0.64
PHGDHO43175 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.08■□□□□ 0.64
PHGDHO43175 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PHGDHO43175 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PHGDHO43175 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PHGDHO43175 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PHGDHO43175 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PHGDHO43175 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.07■□□□□ 0.64
PHGDHO43175 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PHGDHO43175 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PHGDHO43175 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PHGDHO43175 AC090192.1-201ENST00000517740 490 ntBASIC19.07■□□□□ 0.64
PHGDHO43175 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PHGDHO43175 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.07■□□□□ 0.64
PHGDHO43175 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PHGDHO43175 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PHGDHO43175 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.06■□□□□ 0.64
PHGDHO43175 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.06■□□□□ 0.64
PHGDHO43175 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
PHGDHO43175 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.06■□□□□ 0.64
PHGDHO43175 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PHGDHO43175 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
PHGDHO43175 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.06■□□□□ 0.64
PHGDHO43175 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.06■□□□□ 0.64
PHGDHO43175 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PHGDHO43175 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.06■□□□□ 0.64
PHGDHO43175 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.06■□□□□ 0.64
PHGDHO43175 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PHGDHO43175 UNC93B4-201ENST00000505679 747 ntBASIC19.06■□□□□ 0.64
PHGDHO43175 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.06■□□□□ 0.64
PHGDHO43175 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PHGDHO43175 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms