Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.83■□□□□ 0.92
CEP290O15078 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.83■□□□□ 0.92
CEP290O15078 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.83■□□□□ 0.92
CEP290O15078 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CEP290O15078 DNAJB3-202ENST00000449667 1266 ntBASIC20.83■□□□□ 0.92
CEP290O15078 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CEP290O15078 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CEP290O15078 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CEP290O15078 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.83■□□□□ 0.92
CEP290O15078 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.83■□□□□ 0.92
CEP290O15078 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CEP290O15078 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.82■□□□□ 0.92
CEP290O15078 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.82■□□□□ 0.92
CEP290O15078 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.82■□□□□ 0.92
CEP290O15078 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CEP290O15078 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CEP290O15078 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.82■□□□□ 0.92
CEP290O15078 AL136038.4-201ENST00000603606 1261 ntBASIC20.82■□□□□ 0.92
CEP290O15078 AC239800.4-201ENST00000603712 296 ntBASIC20.82■□□□□ 0.92
CEP290O15078 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.82■□□□□ 0.92
CEP290O15078 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CEP290O15078 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEP290O15078 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CEP290O15078 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CEP290O15078 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.81■□□□□ 0.92
CEP290O15078 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CEP290O15078 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CEP290O15078 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.81■□□□□ 0.92
CEP290O15078 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CEP290O15078 YBX2P1-201ENST00000394192 760 ntBASIC20.81■□□□□ 0.92
CEP290O15078 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.81■□□□□ 0.92
CEP290O15078 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.81■□□□□ 0.92
CEP290O15078 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.81■□□□□ 0.92
CEP290O15078 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.81■□□□□ 0.92
CEP290O15078 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CEP290O15078 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CEP290O15078 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CEP290O15078 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.81■□□□□ 0.92
CEP290O15078 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CEP290O15078 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.81■□□□□ 0.92
CEP290O15078 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.81■□□□□ 0.92
CEP290O15078 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.81■□□□□ 0.92
CEP290O15078 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.81■□□□□ 0.92
CEP290O15078 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CEP290O15078 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CEP290O15078 AL024507.2-201ENST00000606070 2574 ntBASIC20.8■□□□□ 0.92
CEP290O15078 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CEP290O15078 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CEP290O15078 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.8■□□□□ 0.92
CEP290O15078 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CEP290O15078 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CEP290O15078 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.8■□□□□ 0.92
CEP290O15078 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.8■□□□□ 0.92
CEP290O15078 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CEP290O15078 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CEP290O15078 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CEP290O15078 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CEP290O15078 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.8■□□□□ 0.92
CEP290O15078 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CEP290O15078 GPX1P2-201ENST00000429271 606 ntBASIC20.8■□□□□ 0.92
CEP290O15078 HLA-J-203ENST00000494367 1087 ntBASIC20.8■□□□□ 0.92
CEP290O15078 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.8■□□□□ 0.92
CEP290O15078 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CEP290O15078 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CEP290O15078 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CEP290O15078 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.79■□□□□ 0.92
CEP290O15078 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.79■□□□□ 0.92
CEP290O15078 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CEP290O15078 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.79■□□□□ 0.92
CEP290O15078 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CEP290O15078 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CEP290O15078 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CEP290O15078 AC211486.1-202ENST00000416371 468 ntBASIC20.79■□□□□ 0.92
CEP290O15078 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms