Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH17O14917 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDH17O14917 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH17O14917 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
PCDH17O14917 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
PCDH17O14917 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDH17O14917 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH17O14917 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH17O14917 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDH17O14917 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH17O14917 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH17O14917 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 FAM197Y1-201ENST00000421178 764 ntBASIC18.32■□□□□ 0.52
PCDH17O14917 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH17O14917 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDH17O14917 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH17O14917 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PCDH17O14917 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDH17O14917 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH17O14917 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PCDH17O14917 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH17O14917 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDH17O14917 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH17O14917 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDH17O14917 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDH17O14917 MIR1224-201ENST00000408193 85 ntBASIC18.31■□□□□ 0.52
PCDH17O14917 AC116562.2-201ENST00000507042 360 ntBASIC18.31■□□□□ 0.52
PCDH17O14917 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDH17O14917 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDH17O14917 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDH17O14917 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDH17O14917 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH17O14917 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH17O14917 Z82202.1-201ENST00000623446 1880 ntBASIC18.31■□□□□ 0.52
PCDH17O14917 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH17O14917 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH17O14917 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH17O14917 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH17O14917 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH17O14917 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH17O14917 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH17O14917 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDH17O14917 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH17O14917 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH17O14917 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PCDH17O14917 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDH17O14917 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH17O14917 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH17O14917 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDH17O14917 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.3■□□□□ 0.52
PCDH17O14917 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PCDH17O14917 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH17O14917 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDH17O14917 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH17O14917 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH17O14917 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDH17O14917 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH17O14917 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH17O14917 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH17O14917 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH17O14917 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH17O14917 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH17O14917 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDH17O14917 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH17O14917 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
PCDH17O14917 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH17O14917 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDH17O14917 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH17O14917 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH17O14917 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH17O14917 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH17O14917 UNC93B2-201ENST00000285383 730 ntBASIC18.29■□□□□ 0.52
PCDH17O14917 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDH17O14917 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.29■□□□□ 0.52
PCDH17O14917 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH17O14917 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH17O14917 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms