Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
UPK1AO00322 AC233263.1-201ENST00000578059 224 ntBASIC18.21■□□□□ 0.51
UPK1AO00322 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 AC069544.1-201ENST00000609399 999 ntBASIC18.21■□□□□ 0.51
UPK1AO00322 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
UPK1AO00322 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UPK1AO00322 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.21■□□□□ 0.51
UPK1AO00322 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1AO00322 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.21■□□□□ 0.5
UPK1AO00322 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
UPK1AO00322 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
UPK1AO00322 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.2■□□□□ 0.5
UPK1AO00322 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.2■□□□□ 0.5
UPK1AO00322 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 AL390961.4-201ENST00000623958 2535 ntBASIC18.2■□□□□ 0.5
UPK1AO00322 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
UPK1AO00322 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
UPK1AO00322 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
UPK1AO00322 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.2■□□□□ 0.5
UPK1AO00322 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.2■□□□□ 0.5
UPK1AO00322 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.2■□□□□ 0.5
UPK1AO00322 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.2■□□□□ 0.5
UPK1AO00322 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.2■□□□□ 0.5
UPK1AO00322 KRT18P16-201ENST00000510337 1294 ntBASIC18.2■□□□□ 0.5
UPK1AO00322 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.2■□□□□ 0.5
UPK1AO00322 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.2■□□□□ 0.5
UPK1AO00322 CD99P1-205ENST00000527459 561 ntBASIC18.2■□□□□ 0.5
UPK1AO00322 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.2■□□□□ 0.5
UPK1AO00322 PRKY-204ENST00000533551 1019 ntBASIC18.2■□□□□ 0.5
UPK1AO00322 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.2■□□□□ 0.5
UPK1AO00322 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.2■□□□□ 0.5
UPK1AO00322 MTDHP1-201ENST00000605323 784 ntBASIC18.2■□□□□ 0.5
UPK1AO00322 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.2■□□□□ 0.5
UPK1AO00322 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.2■□□□□ 0.5
UPK1AO00322 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UPK1AO00322 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UPK1AO00322 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
UPK1AO00322 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1AO00322 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1AO00322 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1AO00322 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1AO00322 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1AO00322 KRT8P8-201ENST00000434750 1448 ntBASIC18.19■□□□□ 0.5
UPK1AO00322 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.19■□□□□ 0.5
UPK1AO00322 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1AO00322 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.19■□□□□ 0.5
UPK1AO00322 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.19■□□□□ 0.5
UPK1AO00322 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1AO00322 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.19■□□□□ 0.5
UPK1AO00322 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.19■□□□□ 0.5
UPK1AO00322 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UPK1AO00322 AC079598.2-202ENST00000546624 1451 ntBASIC18.19■□□□□ 0.5
UPK1AO00322 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.19■□□□□ 0.5
UPK1AO00322 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.19■□□□□ 0.5
UPK1AO00322 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
UPK1AO00322 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.18■□□□□ 0.5
UPK1AO00322 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.18■□□□□ 0.5
UPK1AO00322 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UPK1AO00322 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.18■□□□□ 0.5
UPK1AO00322 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.18■□□□□ 0.5
UPK1AO00322 TUBB8P6-201ENST00000436895 1288 ntBASIC18.18■□□□□ 0.5
UPK1AO00322 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.18■□□□□ 0.5
UPK1AO00322 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.18■□□□□ 0.5
UPK1AO00322 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.18■□□□□ 0.5
UPK1AO00322 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.18■□□□□ 0.5
UPK1AO00322 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.18■□□□□ 0.5
UPK1AO00322 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
UPK1AO00322 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
UPK1AO00322 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UPK1AO00322 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UPK1AO00322 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms