Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.74■□□□□ 0.75
DFFAO00273 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
DFFAO00273 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.74■□□□□ 0.75
DFFAO00273 AC008550.1-201ENST00000511500 884 ntBASIC19.74■□□□□ 0.75
DFFAO00273 Z99916.2-201ENST00000604037 246 ntBASIC19.74■□□□□ 0.75
DFFAO00273 AP006294.2-201ENST00000641667 209 ntBASIC19.74■□□□□ 0.75
DFFAO00273 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.74■□□□□ 0.75
DFFAO00273 TEX21P-204ENST00000641479 1693 ntBASIC19.74■□□□□ 0.75
DFFAO00273 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DFFAO00273 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
DFFAO00273 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.73■□□□□ 0.75
DFFAO00273 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.73■□□□□ 0.75
DFFAO00273 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 AC004980.1-204ENST00000429707 299 ntBASIC19.73■□□□□ 0.75
DFFAO00273 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.73■□□□□ 0.75
DFFAO00273 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.73■□□□□ 0.75
DFFAO00273 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.73■□□□□ 0.75
DFFAO00273 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.73■□□□□ 0.75
DFFAO00273 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.73■□□□□ 0.75
DFFAO00273 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.73■□□□□ 0.75
DFFAO00273 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.73■□□□□ 0.75
DFFAO00273 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.73■□□□□ 0.75
DFFAO00273 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
DFFAO00273 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.73■□□□□ 0.75
DFFAO00273 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
DFFAO00273 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DFFAO00273 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DFFAO00273 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DFFAO00273 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DFFAO00273 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.72■□□□□ 0.75
DFFAO00273 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
DFFAO00273 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DFFAO00273 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DFFAO00273 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DFFAO00273 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DFFAO00273 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.72■□□□□ 0.75
DFFAO00273 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DFFAO00273 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DFFAO00273 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DFFAO00273 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.72■□□□□ 0.75
DFFAO00273 AC012618.2-201ENST00000428058 849 ntBASIC19.72■□□□□ 0.75
DFFAO00273 AC233702.5-201ENST00000584107 538 ntBASIC19.72■□□□□ 0.75
DFFAO00273 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.72■□□□□ 0.75
DFFAO00273 CD177P1-201ENST00000606252 935 ntBASIC19.72■□□□□ 0.75
DFFAO00273 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.72■□□□□ 0.75
DFFAO00273 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.72■□□□□ 0.75
DFFAO00273 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.72■□□□□ 0.75
DFFAO00273 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DFFAO00273 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
DFFAO00273 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.71■□□□□ 0.75
DFFAO00273 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
DFFAO00273 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.71■□□□□ 0.75
DFFAO00273 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.71■□□□□ 0.75
DFFAO00273 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.71■□□□□ 0.75
DFFAO00273 AP001412.1-201ENST00000608405 714 ntBASIC19.71■□□□□ 0.75
DFFAO00273 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.71■□□□□ 0.75
DFFAO00273 AL049637.2-201ENST00000641778 930 ntBASIC19.71■□□□□ 0.75
DFFAO00273 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.71■□□□□ 0.75
DFFAO00273 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.71■□□□□ 0.75
DFFAO00273 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DFFAO00273 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DFFAO00273 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.7■□□□□ 0.74
DFFAO00273 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DFFAO00273 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
DFFAO00273 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DFFAO00273 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DFFAO00273 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DFFAO00273 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DFFAO00273 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms