Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM1O00151 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.25■□□□□ 0.51
PDLIM1O00151 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.25■□□□□ 0.51
PDLIM1O00151 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 AC133552.2-202ENST00000575694 574 ntBASIC18.25■□□□□ 0.51
PDLIM1O00151 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM1O00151 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.25■□□□□ 0.51
PDLIM1O00151 AL356652.1-201ENST00000615962 565 ntBASIC18.25■□□□□ 0.51
PDLIM1O00151 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.25■□□□□ 0.51
PDLIM1O00151 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.25■□□□□ 0.51
PDLIM1O00151 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.25■□□□□ 0.51
PDLIM1O00151 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDLIM1O00151 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDLIM1O00151 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDLIM1O00151 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDLIM1O00151 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM1O00151 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM1O00151 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
PDLIM1O00151 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
PDLIM1O00151 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM1O00151 AC090164.3-201ENST00000610780 2143 ntBASIC18.24■□□□□ 0.51
PDLIM1O00151 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.24■□□□□ 0.51
PDLIM1O00151 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.24■□□□□ 0.51
PDLIM1O00151 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.24■□□□□ 0.51
PDLIM1O00151 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PDLIM1O00151 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDLIM1O00151 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDLIM1O00151 KRT8P17-201ENST00000453110 1448 ntBASIC18.23■□□□□ 0.51
PDLIM1O00151 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
PDLIM1O00151 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.23■□□□□ 0.51
PDLIM1O00151 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDLIM1O00151 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDLIM1O00151 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.23■□□□□ 0.51
PDLIM1O00151 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.23■□□□□ 0.51
PDLIM1O00151 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.23■□□□□ 0.51
PDLIM1O00151 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.23■□□□□ 0.51
PDLIM1O00151 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.23■□□□□ 0.51
PDLIM1O00151 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.23■□□□□ 0.51
PDLIM1O00151 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PDLIM1O00151 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PDLIM1O00151 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDLIM1O00151 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.23■□□□□ 0.51
PDLIM1O00151 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDLIM1O00151 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.22■□□□□ 0.51
PDLIM1O00151 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
PDLIM1O00151 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDLIM1O00151 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDLIM1O00151 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDLIM1O00151 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDLIM1O00151 ID1-201ENST00000376105 1233 ntBASIC18.22■□□□□ 0.51
PDLIM1O00151 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.22■□□□□ 0.51
PDLIM1O00151 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.22■□□□□ 0.51
PDLIM1O00151 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PDLIM1O00151 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM1O00151 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.22■□□□□ 0.51
PDLIM1O00151 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.22■□□□□ 0.51
PDLIM1O00151 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.22■□□□□ 0.51
PDLIM1O00151 AC016405.3-201ENST00000607710 860 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms