Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 SLC25A24-204ENST00000569674 2357 ntBASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 AC130371.2-201ENST00000619443 611 ntBASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 RCC2P6-201ENST00000526625 1557 ntBASIC17.49■□□□□ 0.39
NPIPA3F8WFD2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 AC004951.3-201ENST00000418645 1148 ntBASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 AP005242.2-201ENST00000580065 1175 ntBASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA3F8WFD2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 SLC25A3P1-201ENST00000443844 931 ntBASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 AL049597.2-201ENST00000565575 961 ntBASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA3F8WFD2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 AP000692.2-201ENST00000608391 879 ntBASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPIPA3F8WFD2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms