Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.5■□□□□ 0.39
NPIPA2E9PIF3 AC011298.2-201ENST00000617989 482 ntBASIC17.5■□□□□ 0.39
NPIPA2E9PIF3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.5■□□□□ 0.39
NPIPA2E9PIF3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
NPIPA2E9PIF3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA2E9PIF3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA2E9PIF3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPIPA2E9PIF3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 SLC25A24-204ENST00000569674 2357 ntBASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 AC130371.2-201ENST00000619443 611 ntBASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 RCC2P6-201ENST00000526625 1557 ntBASIC17.49■□□□□ 0.39
NPIPA2E9PIF3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 AC004951.3-201ENST00000418645 1148 ntBASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 AP005242.2-201ENST00000580065 1175 ntBASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NPIPA2E9PIF3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 AL049597.2-201ENST00000565575 961 ntBASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPIPA2E9PIF3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms