Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 AL691447.1-201ENST00000419456 387 ntBASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 TSPY7P-201ENST00000431358 1114 ntBASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 AC006518.1-201ENST00000541449 943 ntBASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
SPDYE4A6NLX3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 KRASP1-201ENST00000407852 552 ntBASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 MIR1224-201ENST00000408193 85 ntBASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 NOC2LP1-202ENST00000452600 2235 ntBASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SPDYE4A6NLX3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 RPS2P55-201ENST00000397318 883 ntBASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 AC107956.1-201ENST00000494359 873 ntBASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.55■■□□□ 1.04
SPDYE4A6NLX3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 AC020916.1-201ENST00000587762 1774 ntBASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 MTDHP1-201ENST00000605323 784 ntBASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 AC124016.1-201ENST00000609552 612 ntBASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 AC120498.8-201ENST00000614275 531 ntBASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SPDYE4A6NLX3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms