Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 TSPY21P-201ENST00000433481 731 ntBASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV19A0A0A6YYK7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 FAM8A6P-201ENST00000407496 1135 ntBASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 AC140113.3-201ENST00000605663 199 ntBASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 KRT8P45-201ENST00000414328 1447 ntBASIC19.85■□□□□ 0.77
TRAV19A0A0A6YYK7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 TSPY23P-201ENST00000440136 739 ntBASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 AC011558.1-201ENST00000623459 338 ntBASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAV19A0A0A6YYK7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 SDHAP1-207ENST00000440850 2000 ntBASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.83■□□□□ 0.77
TRAV19A0A0A6YYK7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.83■□□□□ 0.76
TRAV19A0A0A6YYK7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV19A0A0A6YYK7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.83■□□□□ 0.76
TRAV19A0A0A6YYK7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV19A0A0A6YYK7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV19A0A0A6YYK7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV19A0A0A6YYK7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.83■□□□□ 0.76
TRAV19A0A0A6YYK7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV19A0A0A6YYK7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms