Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV27A0A087WT01 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV27A0A087WT01 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 FP475955.4-201ENST00000623131 1990 ntBASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 AC090192.1-201ENST00000517740 490 ntBASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 AL138781.2-201ENST00000617896 1843 ntBASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV27A0A087WT01 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 IRX1P1-201ENST00000438849 1838 ntBASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 UNC93B4-201ENST00000505679 747 ntBASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV27A0A087WT01 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 AL355802.2-201ENST00000402069 882 ntBASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TRAV27A0A087WT01 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms