Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AC016065.2-201ENST00000514530 444 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 RNU6-397P-201ENST00000516226 104 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 RNU6-352P-201ENST00000516908 107 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 CDH12P4-201ENST00000517835 295 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 CDH12P3-201ENST00000517935 295 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 CDH12P1-201ENST00000518435 295 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AP003733.2-201ENST00000529409 171 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 MIR5692A1-201ENST00000580523 69 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AC068768.2-201ENST00000602352 343 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AC123786.2-201ENST00000603459 275 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AC002044.1-201ENST00000606707 158 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 SNORA74.4-201ENST00000607595 199 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AL591516.1-201ENST00000611326 274 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 U1.25-201ENST00000614085 162 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 FTX_2.1-201ENST00000618816 94 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 AL137067.2-201ENST00000621202 131 ntBASIC5.65□□□□□ -1.5
HRH3Q9Y5N1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 AC079753.1-201ENST00000623243 3868 ntBASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HRH3Q9Y5N1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 Y_RNA.20-201ENST00000362479 113 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 SNORD27-201ENST00000363981 72 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 RNA5SP435-201ENST00000364044 108 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 MIR433-201ENST00000384837 93 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC005522.1-201ENST00000395416 346 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 SDAD1P3-201ENST00000427380 333 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 CYCSP43-201ENST00000438233 310 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 PPIAP20-201ENST00000449839 135 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC239809.1-201ENST00000450470 217 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 HLA-DPA3-207ENST00000454398 229 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC007967.1-201ENST00000455422 1159 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 RNU6-953P-201ENST00000459154 107 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 RNU7-169P-201ENST00000459456 61 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC025458.1-201ENST00000506046 166 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC026784.1-201ENST00000507986 352 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 RNU6-897P-201ENST00000517135 105 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC015720.2-201ENST00000567709 334 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC090517.1-201ENST00000569307 266 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 OR1F2P-201ENST00000570470 933 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC012433.1-201ENST00000588916 398 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC006363.1-201ENST00000603806 463 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 TCL6_3.1-201ENST00000619064 137 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AL159153.1-201ENST00000619688 317 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 AC073488.3-201ENST00000631611 778 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 SHQ1P1-201ENST00000437111 1544 ntBASIC5.64□□□□□ -1.51
HRH3Q9Y5N1 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms