Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 A2MP1-204ENST00000566278 4130 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC012020.1-201ENST00000624541 1728 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC009951.1-201ENST00000623674 2614 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 GNG5P1-201ENST00000255500 204 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 OR4G2P-201ENST00000328113 903 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 RNY4P34-201ENST00000364779 95 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 RNU6-761P-201ENST00000384148 107 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC097374.1-203ENST00000400783 485 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 RNU2-8P-201ENST00000410727 190 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 UQCRBP1-201ENST00000421129 336 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 RPS12P5-201ENST00000423449 371 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC005517.2-201ENST00000424673 553 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 RPS27AP12-201ENST00000429552 465 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 Z95327.1-201ENST00000446082 482 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC021382.1-201ENST00000483523 359 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC012170.1-201ENST00000495139 359 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC108145.1-201ENST00000503770 153 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 PARP4P3-201ENST00000510265 317 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 RNU6-27P-201ENST00000516146 107 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC022616.6-201ENST00000520479 119 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC008638.3-201ENST00000603341 463 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC007546.1-201ENST00000619452 559 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC110994.2-201ENST00000635481 492 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 AC010149.2-201ENST00000637608 315 ntBASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHA3Q9Y5H8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC008033.1-201ENST00000216407 1162 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 MIR181A1-201ENST00000385026 110 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 U3.20-201ENST00000390909 217 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 PIGFP2-201ENST00000421400 651 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 USP9YP9-201ENST00000429406 715 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 ELOCP18-201ENST00000434209 337 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AL353748.1-201ENST00000440753 474 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 RPL29P29-201ENST00000448725 423 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 RPL7P15-201ENST00000461190 712 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 RPL23AP41-201ENST00000484754 458 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC108078.1-201ENST00000508073 725 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 PGBD4P4-201ENST00000509673 613 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 TMEM248P1-201ENST00000510579 951 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC011352.1-201ENST00000512300 793 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 RNU6-1178P-201ENST00000516674 107 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AP003497.1-201ENST00000528472 562 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 HMGB3P26-201ENST00000560051 582 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC084783.1-201ENST00000565846 910 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AL391840.1-201ENST00000571144 367 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC010680.4-201ENST00000605334 543 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms