Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 RNU6-989P-201ENST00000362756 107 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 RN7SKP128-201ENST00000364270 303 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 U3.10-201ENST00000364459 214 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 SNORA23-201ENST00000365128 182 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 RNA5SP211-201ENST00000365516 117 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 Y_RNA.485-201ENST00000384395 102 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 RNU6-45P-201ENST00000384471 107 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC110754.1-201ENST00000399740 601 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC092447.6-201ENST00000414578 210 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC099677.3-201ENST00000427081 395 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC011816.1-201ENST00000441346 546 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AL121871.1-201ENST00000443413 436 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 SUMO1P2-201ENST00000452524 304 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC112492.4-201ENST00000456549 352 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 CEACAMP4-201ENST00000457676 421 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC012400.1-201ENST00000518452 381 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC131281.1-201ENST00000522984 164 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC007956.1-201ENST00000555623 542 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 RPA2P1-201ENST00000556557 721 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 MIR4512-201ENST00000583257 77 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC006115.2-201ENST00000596823 202 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 HMGN2P28-201ENST00000606102 262 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 MIR6721-201ENST00000617181 87 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 MIR8062-201ENST00000621515 85 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 SNX18P12-201ENST00000624821 759 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC073488.3-201ENST00000631611 778 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 HSPA8P4-201ENST00000511877 1920 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 MFSD8-239ENST00000641590 2479 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 ADAM24P-201ENST00000398655 2101 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC005224.3-201ENST00000584683 2140 ntBASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHGA11Q9Y5H2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC012254.3-201ENST00000591183 2117 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 RNA5SP453-201ENST00000362503 119 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 SNORD14.1-201ENST00000365609 90 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC115283.1-201ENST00000427353 400 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC023141.3-201ENST00000436698 278 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 RNU7-138P-201ENST00000459479 64 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC008571.1-201ENST00000467232 300 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 CEACAMP10-202ENST00000495431 496 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 SLC25A15P5-201ENST00000508033 253 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC092436.3-201ENST00000511788 257 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 RNU6-408P-201ENST00000515910 100 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 RNU6-1143P-201ENST00000516125 104 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC092121.1-201ENST00000569452 202 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC138207.8-204ENST00000579588 527 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 MIR4716-201ENST00000579628 84 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC012119.1-201ENST00000603184 222 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms