Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 AC144833.1-201ENST00000567953 4089 ntBASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.95□□□□□ -1.3
PDZRN3Q9UPQ7 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-593P-201ENST00000364716 112 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-730P-201ENST00000383954 104 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 Y_RNA.404-201ENST00000383978 102 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 AL360182.1-201ENST00000397433 468 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 RNU4-25P-201ENST00000410569 230 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 FTLP19-201ENST00000433300 394 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 GAPDHP14-201ENST00000450472 937 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 RPL37P3-201ENST00000456825 293 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 RPL7P6-201ENST00000480903 738 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 AC091912.1-201ENST00000511351 248 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-256P-201ENST00000516747 97 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 PMS2P3-207ENST00000529061 717 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 AC093799.2-201ENST00000610062 578 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 AL365265.1-201ENST00000621045 234 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 AL159972.1-201ENST00000625150 448 ntBASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
PDZRN3Q9UPQ7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 ABCC13-202ENST00000463099 3842 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6-582P-201ENST00000362989 107 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 SNORD113-7-201ENST00000363762 77 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 SNORD20-201ENST00000384550 80 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 SNORD58.1-201ENST00000391313 66 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AL009179.1-201ENST00000406085 265 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 MIR548H3-201ENST00000408771 118 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AC007161.1-204ENST00000423039 460 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AC099799.1-201ENST00000439809 192 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AL035090.1-201ENST00000454835 332 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 RPS23P3-201ENST00000470993 430 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 RFPL4AP3-201ENST00000515267 345 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 SCARNA24.1-201ENST00000516465 137 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 HMGB1P40-201ENST00000525121 540 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AC025260.1-201ENST00000548858 430 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 HMGB1P50-201ENST00000605814 607 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 AC100827.5-201ENST00000615883 426 ntBASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
PDZRN3Q9UPQ7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AL359893.1-201ENST00000447628 1580 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 BCORP1-203ENST00000513194 5093 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC092125.1-201ENST00000562568 1995 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 RNU4-48P-201ENST00000365559 182 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 SNORA11C-201ENST00000408532 129 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 Y_RNA.793-201ENST00000411222 111 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AL139156.1-201ENST00000412785 841 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 ARL5AP1-201ENST00000418991 388 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 REREP1Y-201ENST00000422655 198 ntBASIC6.92□□□□□ -1.3
PDZRN3Q9UPQ7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms