Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC008083.4-201ENST00000615076 444 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 SRP72P2-201ENST00000344851 1979 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AC024341.1-201ENST00000526444 1552 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 AC004972.1-201ENST00000623934 2209 ntBASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.28□□□□□ -1.88
LRRC40Q9H9A6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
LRRC40Q9H9A6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 GDI2P1-201ENST00000429312 1336 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 DBF4P1-201ENST00000412976 1892 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 RNU6-354P-201ENST00000383862 107 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 RNU6-610P-201ENST00000384264 107 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AL133264.1-201ENST00000407157 562 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 MTATP6P4-201ENST00000427725 675 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 snoU109.4-201ENST00000458953 143 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 RNA5SP310-201ENST00000459084 116 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 RPL21P8-201ENST00000465083 535 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 ST13P14-201ENST00000474095 734 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC114967.1-201ENST00000504890 259 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC091860.1-201ENST00000505723 432 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AP001207.2-201ENST00000519490 539 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AP001804.3-201ENST00000525146 880 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AP001317.1-201ENST00000531194 960 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 TRAV37-201ENST00000553906 342 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 MIR3158-1-201ENST00000583596 81 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC106900.2-201ENST00000604994 317 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AP005229.2-201ENST00000609980 697 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC106028.5-201ENST00000610332 395 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC091925.2-201ENST00000625059 256 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 MTND5P27-201ENST00000428871 1720 ntBASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC40Q9H9A6 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 RNU6-839P-201ENST00000363347 108 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 MIR449B-201ENST00000384995 97 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 SAR1AP2-201ENST00000392696 594 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AC016769.3-201ENST00000396562 315 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 MTCO2P1-201ENST00000424648 477 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 UBE2D3P3-201ENST00000426992 425 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 Z95327.1-201ENST00000446082 482 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 SEPT14P24-201ENST00000447236 180 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AC008155.2-201ENST00000464337 397 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 MTCO2P9-201ENST00000503214 694 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 RNU6-334P-201ENST00000517072 102 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 NCAPGP2-201ENST00000557911 754 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 RPAP2P1-201ENST00000603626 1168 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AC009220.3-201ENST00000604318 586 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AC010738.1-201ENST00000604970 987 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AL451074.6-201ENST00000608512 729 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AC009464.1-201ENST00000615731 469 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AC006133.1-201ENST00000617106 264 ntBASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LRRC40Q9H9A6 AL079305.1-201ENST00000623159 3008 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 U3.42-201ENST00000408746 214 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms