Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU1-55P-201ENST00000365510 158 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 RNU6-804P-201ENST00000384286 107 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 Y_RNA.534-201ENST00000384599 112 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 MIR541-201ENST00000401360 84 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 AL079342.1-201ENST00000401460 267 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 AC083806.1-201ENST00000468934 316 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 RN7SL70P-201ENST00000478322 302 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 RNU6-496P-201ENST00000516145 99 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 FXNP1-201ENST00000555153 337 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 MIR3144-201ENST00000579460 79 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 AC024267.2-201ENST00000582737 417 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 AC067852.5-201ENST00000589299 310 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 MIR6885-201ENST00000612241 66 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 U6.106-201ENST00000636360 105 ntBASIC5.91□□□□□ -1.46
USB1Q9BQ65 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
USB1Q9BQ65 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USB1Q9BQ65 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.91□□□□□ -1.46
USB1Q9BQ65 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
USB1Q9BQ65 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
USB1Q9BQ65 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
USB1Q9BQ65 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
USB1Q9BQ65 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
USB1Q9BQ65 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
USB1Q9BQ65 GUCY1B2-204ENST00000531898 1979 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
USB1Q9BQ65 Y_RNA.8-201ENST00000362353 102 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 RNU6-290P-201ENST00000365212 101 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 RNU6-102P-201ENST00000384485 104 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 AL929472.1-201ENST00000417484 429 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
USB1Q9BQ65 PPP1R11P2-201ENST00000423543 382 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 AC093655.2-201ENST00000425735 631 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 AC090774.1-201ENST00000435925 246 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 USP9YP7-201ENST00000436723 430 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 RPL26P6-201ENST00000440913 438 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 MRPL48P1-201ENST00000445390 636 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 USP9YP32-201ENST00000452432 430 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 RN7SKP210-201ENST00000459176 261 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 RN7SL836P-201ENST00000476140 296 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 RPS15AP34-201ENST00000487776 387 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 HMGN1P11-201ENST00000508668 303 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 RN7SKP277-201ENST00000516895 283 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 AC109479.2-201ENST00000517842 174 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 RAB9BP1-201ENST00000519581 626 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 AC106785.4-201ENST00000569492 412 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 AC009314.1-201ENST00000603871 304 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 AC009318.2-201ENST00000610917 651 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 AC004852.3-201ENST00000614131 326 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 AC097372.5-201ENST00000623665 376 ntBASIC5.9□□□□□ -1.46
USB1Q9BQ65 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
USB1Q9BQ65 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.9□□□□□ -1.46
USB1Q9BQ65 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
USB1Q9BQ65 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
USB1Q9BQ65 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.9□□□□□ -1.47
USB1Q9BQ65 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
USB1Q9BQ65 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.9□□□□□ -1.47
USB1Q9BQ65 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.9□□□□□ -1.47
USB1Q9BQ65 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
USB1Q9BQ65 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 PRO1804-201ENST00000623780 2050 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 AC114947.2-201ENST00000565748 2125 ntBASIC5.89□□□□□ -1.47
USB1Q9BQ65 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.89□□□□□ -1.47
USB1Q9BQ65 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
USB1Q9BQ65 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms