Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 STX3-208ENST00000641815 3236 ntBASIC6.44□□□□□ -1.38
CCDC85AQ96PX6 MTND5P19-201ENST00000424872 1794 ntBASIC6.44□□□□□ -1.38
CCDC85AQ96PX6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.44□□□□□ -1.38
CCDC85AQ96PX6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AL355834.1-201ENST00000556602 3965 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 MT-TR-201ENST00000387439 65 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 RNU6-278P-201ENST00000390945 109 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AL121834.1-202ENST00000404494 277 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 MIR548F4-201ENST00000408515 105 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 RNU6-847P-201ENST00000411115 108 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 HMGN1P24-201ENST00000412282 298 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 MRPS21P2-201ENST00000424704 264 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 RPL7L1P10-201ENST00000427790 463 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AC104308.1-201ENST00000454621 333 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 PLGLA-201ENST00000465668 449 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AC017037.2-201ENST00000513850 890 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AC104057.1-201ENST00000515547 497 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 HMGB1P19-201ENST00000517578 577 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 CDH12P4-201ENST00000517835 295 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 CDH12P3-201ENST00000517935 295 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 CDH12P1-201ENST00000518435 295 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 OR4P1P-201ENST00000530808 1136 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AP000763.2-201ENST00000540641 163 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 AC022893.3-201ENST00000607665 437 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 U6.114-201ENST00000636407 96 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 SOCS5P3-201ENST00000425115 1576 ntBASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC85AQ96PX6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 RNU6-82P-201ENST00000363970 107 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 Y_RNA.193-201ENST00000363979 102 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 Y_RNA.212-201ENST00000364177 102 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 Y_RNA.482-201ENST00000384377 111 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 MIR589-201ENST00000385238 99 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 RN7SKP247-201ENST00000411094 308 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 RPS12P24-201ENST00000412619 387 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AC234779.1-201ENST00000425910 285 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 OR2AS1P-201ENST00000427827 319 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 FTH1P1-201ENST00000437933 532 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 HMGB3P11-201ENST00000440127 604 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 Z98949.2-201ENST00000440996 144 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AL035666.1-201ENST00000446195 348 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 RPL30P15-201ENST00000457129 321 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 OR7H2P-201ENST00000513483 306 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AL671862.1-201ENST00000515851 349 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 RNU6-1137P-201ENST00000517073 99 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AC024224.1-201ENST00000538284 609 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AC008269.2-201ENST00000561915 1105 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 MIR4504-201ENST00000577413 92 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 COX6CP3-201ENST00000580869 223 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 MIR4680-201ENST00000580906 66 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AL031666.3-201ENST00000609320 1006 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 NXPH1-205ENST00000602349 1953 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 AC092070.2-203ENST00000598377 3644 ntBASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC85AQ96PX6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC85AQ96PX6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 381.4 ms