Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL21A1Q96P44 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL21A1Q96P44 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL21A1Q96P44 RNU6-374P-201ENST00000364146 108 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 RNU6-481P-201ENST00000384194 107 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 AP000567.1-201ENST00000406413 156 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL21A1Q96P44 MOB1AP2-201ENST00000446060 614 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 AC005002.1-201ENST00000447458 540 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 NPM1P13-201ENST00000452663 865 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 RN7SL863P-201ENST00000462370 296 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
COL21A1Q96P44 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL21A1Q96P44 HMGB3P15-201ENST00000507326 574 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 RN7SKP43-201ENST00000516173 320 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 RNU1-103P-201ENST00000516502 125 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 LSM6P2-201ENST00000552208 177 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 MAGOH2P-202ENST00000584384 429 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 AC005000.2-201ENST00000605468 310 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 AC138932.5-201ENST00000617759 563 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 AC093875.1-201ENST00000623688 504 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 AC106730.3-201ENST00000624568 641 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL21A1Q96P44 AC004925.1-201ENST00000624256 2706 ntBASIC2.93□□□□□ -1.94
COL21A1Q96P44 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
COL21A1Q96P44 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL21A1Q96P44 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL21A1Q96P44 MTND4P34-201ENST00000572715 1371 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL21A1Q96P44 RNU6-619P-201ENST00000365146 108 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 RNU6-339P-201ENST00000384310 107 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 BX664727.1-201ENST00000416024 466 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 RPP40P1-201ENST00000426762 456 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 RPS12P18-201ENST00000442381 270 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AL050341.1-201ENST00000447743 313 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 PRDX3P4-201ENST00000470828 747 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC006483.1-201ENST00000487308 313 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 AL024509.2-201ENST00000493462 493 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 MTCO2P32-201ENST00000514865 403 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 IGKV2D-36-201ENST00000518643 226 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC087272.1-201ENST00000523624 533 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC024224.1-201ENST00000538284 609 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC010735.1-201ENST00000567305 1026 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC133794.1-201ENST00000602731 914 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC016877.3-201ENST00000606778 504 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AL136164.4-201ENST00000625013 2135 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL21A1Q96P44 AC110774.1-201ENST00000623567 2018 ntBASIC2.92□□□□□ -1.94
COL21A1Q96P44 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
COL21A1Q96P44 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL21A1Q96P44 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL21A1Q96P44 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
COL21A1Q96P44 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms