Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MIR6733-201ENST00000635723 61 ntBASIC3.62□□□□□ -1.83
USP47Q96K76 AC022031.1-201ENST00000585985 2593 ntBASIC3.61□□□□□ -1.83
USP47Q96K76 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP47Q96K76 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.61□□□□□ -1.83
USP47Q96K76 MIR153-1-201ENST00000384914 90 ntBASIC3.61□□□□□ -1.83
USP47Q96K76 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP47Q96K76 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.61□□□□□ -1.83
USP47Q96K76 MTND4LP14-201ENST00000429447 288 ntBASIC3.61□□□□□ -1.83
USP47Q96K76 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.61□□□□□ -1.83
USP47Q96K76 RPS20P32-201ENST00000456044 356 ntBASIC3.61□□□□□ -1.83
USP47Q96K76 SNORD108-201ENST00000459332 71 ntBASIC3.61□□□□□ -1.83
USP47Q96K76 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.61□□□□□ -1.83
USP47Q96K76 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.61□□□□□ -1.83
USP47Q96K76 AC025016.1-201ENST00000616746 682 ntBASIC3.61□□□□□ -1.83
USP47Q96K76 AC116096.1-201ENST00000566804 2314 ntBASIC3.61□□□□□ -1.83
USP47Q96K76 MTCO1P14-201ENST00000441695 1559 ntBASIC3.6□□□□□ -1.83
USP47Q96K76 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP47Q96K76 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP47Q96K76 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP47Q96K76 EI24P2-201ENST00000397776 1076 ntBASIC3.6□□□□□ -1.83
USP47Q96K76 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.6□□□□□ -1.83
USP47Q96K76 AC092832.1-201ENST00000422934 400 ntBASIC3.6□□□□□ -1.83
USP47Q96K76 MTND4P24-201ENST00000424002 397 ntBASIC3.6□□□□□ -1.83
USP47Q96K76 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.6□□□□□ -1.83
USP47Q96K76 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.6□□□□□ -1.83
USP47Q96K76 AL590639.1-201ENST00000456484 337 ntBASIC3.6□□□□□ -1.83
USP47Q96K76 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.6□□□□□ -1.83
USP47Q96K76 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.6□□□□□ -1.83
USP47Q96K76 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.6□□□□□ -1.83
USP47Q96K76 OR7K1P-201ENST00000546439 926 ntBASIC3.6□□□□□ -1.83
USP47Q96K76 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.6□□□□□ -1.83
USP47Q96K76 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.6□□□□□ -1.83
USP47Q96K76 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.6□□□□□ -1.83
USP47Q96K76 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP47Q96K76 AC068722.2-201ENST00000618734 544 ntBASIC3.6□□□□□ -1.83
USP47Q96K76 MIR7843-201ENST00000622274 79 ntBASIC3.6□□□□□ -1.83
USP47Q96K76 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
USP47Q96K76 EXOC5P1-201ENST00000510543 1969 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.83
USP47Q96K76 AC066616.2-201ENST00000559334 1481 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.59□□□□□ -1.83
USP47Q96K76 METTL21EP-201ENST00000298105 713 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 SNORD51.1-201ENST00000365405 77 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.59□□□□□ -1.83
USP47Q96K76 TAF9BP2-201ENST00000400856 499 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 AL513175.2-201ENST00000422071 443 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 CR848007.2-201ENST00000424918 787 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 AC093151.1-201ENST00000427711 313 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 COX6CP2-201ENST00000444980 225 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.59□□□□□ -1.83
USP47Q96K76 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.59□□□□□ -1.83
USP47Q96K76 RPL21P103-201ENST00000479921 488 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.59□□□□□ -1.83
USP47Q96K76 AC008549.1-201ENST00000512900 643 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 RNA5SP148-201ENST00000516527 94 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.59□□□□□ -1.83
USP47Q96K76 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
USP47Q96K76 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
USP47Q96K76 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.59□□□□□ -1.83
USP47Q96K76 AC090617.9-201ENST00000623751 147 ntBASIC3.59□□□□□ -1.83
USP47Q96K76 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.59□□□□□ -1.84
USP47Q96K76 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP47Q96K76 MIR592-201ENST00000384959 97 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 RNU2-17P-201ENST00000410290 190 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 AC069218.2-201ENST00000411665 344 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 VTA1P1-201ENST00000414044 866 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 RPL31P45-201ENST00000419532 356 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 USP9YP7-201ENST00000436723 430 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.58□□□□□ -1.84
USP47Q96K76 MTND5P8-201ENST00000449817 1083 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 RPL23AP15-201ENST00000450202 459 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 USP9YP32-201ENST00000452432 430 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 SNRPGP5-201ENST00000456003 220 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 AC133134.1-201ENST00000466800 359 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.58□□□□□ -1.84
USP47Q96K76 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.58□□□□□ -1.84
USP47Q96K76 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.58□□□□□ -1.84
USP47Q96K76 ANXA2P1-201ENST00000505539 926 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.58□□□□□ -1.84
USP47Q96K76 RN7SKP283-201ENST00000517197 270 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 CKS1BP7-201ENST00000522230 235 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 CIR1P1-201ENST00000524055 1133 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.58□□□□□ -1.84
USP47Q96K76 SNORD53-201ENST00000579969 78 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 LLPHP1-201ENST00000603571 367 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 AC105429.2-201ENST00000610567 517 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 U6.107-201ENST00000637108 79 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 XPOTP1-201ENST00000443317 2398 ntBASIC3.58□□□□□ -1.84
USP47Q96K76 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.58□□□□□ -1.84
USP47Q96K76 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP47Q96K76 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP47Q96K76 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
USP47Q96K76 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP47Q96K76 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
USP47Q96K76 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP47Q96K76 SNORD21-201ENST00000383953 95 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 HMGB1P10-201ENST00000395823 563 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 PRELID3BP11-201ENST00000414230 479 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 USP9YP20-201ENST00000419224 558 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms